(36 nodes) Dynein complex network (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4P0V3_BATDJ	Uncharacterized protein. (117 aa)
	F4P0Y6_BATDJ	Uncharacterized protein. (4175 aa)
	F4P1Q3_BATDJ	Uncharacterized protein. (4290 aa)
	F4P2M4_BATDJ	Dynein light chain roadblock. (97 aa)
	F4P3Q5_BATDJ	Uncharacterized protein. (257 aa)
	F4P3U0_BATDJ	Uncharacterized protein. (4717 aa)
	F4P414_BATDJ	Uncharacterized protein. (4521 aa)
	F4P415_BATDJ	Dynein_C domain-containing protein. (164 aa)
	F4P477_BATDJ	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (101 aa)
	F4P497_BATDJ	Uncharacterized protein. (4069 aa)
	F4P4A3_BATDJ	Uncharacterized protein; Belongs to the NDK family. (1093 aa)
	F4P4X3_BATDJ	CAP-Gly domain-containing protein. (1776 aa)
	F4P7T3_BATDJ	Uncharacterized protein. (780 aa)
	F4P800_BATDJ	Uncharacterized protein. (205 aa)
	F4P899_BATDJ	Uncharacterized protein. (191 aa)
	F4P8Z2_BATDJ	Uncharacterized protein. (4551 aa)
	F4P9W6_BATDJ	Uncharacterized protein. (4555 aa)
	F4PBJ8_BATDJ	Uncharacterized protein. (4507 aa)
	F4PDA3_BATDJ	Robl_LC7 domain-containing protein. (105 aa)
	F4PEI1_BATDJ	Uncharacterized protein. (4176 aa)
	F4P7V2_BATDJ	Uncharacterized protein. (4559 aa)
	F4NRF2_BATDJ	Uncharacterized protein. (975 aa)
	F4NRW8_BATDJ	WD_REPEATS_REGION domain-containing protein. (425 aa)
	F4NSI2_BATDJ	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (128 aa)
	F4NT34_BATDJ	Uncharacterized protein. (833 aa)
	F4NTC4_BATDJ	Uncharacterized protein. (113 aa)
	F4NTL5_BATDJ	WD_REPEATS_REGION domain-containing protein. (594 aa)
	F4NTR4_BATDJ	Expressed protein. (382 aa)
	F4NTT8_BATDJ	WD_REPEATS_REGION domain-containing protein. (878 aa)
	F4NV80_BATDJ	Uncharacterized protein. (632 aa)
	F4NW15_BATDJ	EF-hand domain-containing protein. (4015 aa)
	F4NY46_BATDJ	Uncharacterized protein. (404 aa)
	F4NYT4_BATDJ	F-box domain-containing protein. (6976 aa)
	F4NZL6_BATDJ	WD_REPEATS_REGION domain-containing protein. (717 aa)
	F4NZW9_BATDJ	Uncharacterized protein. (520 aa)
	F4P0N8_BATDJ	Uncharacterized protein. (3948 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NRF2_BATDJ	F4NSI2_BATDJ	F4NRF2	F4NSI2	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.768
F4NRF2_BATDJ	F4NTC4_BATDJ	F4NRF2	F4NTC4	Uncharacterized protein.	Uncharacterized protein.	0.818
F4NRF2_BATDJ	F4NTL5_BATDJ	F4NRF2	F4NTL5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.610
F4NRF2_BATDJ	F4NTR4_BATDJ	F4NRF2	F4NTR4	Uncharacterized protein.	Expressed protein.	0.720
F4NRF2_BATDJ	F4NTT8_BATDJ	F4NRF2	F4NTT8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.811
F4NRF2_BATDJ	F4NV80_BATDJ	F4NRF2	F4NV80	Uncharacterized protein.	Uncharacterized protein.	0.794
F4NRF2_BATDJ	F4NW15_BATDJ	F4NRF2	F4NW15	Uncharacterized protein.	EF-hand domain-containing protein.	0.866
F4NRF2_BATDJ	F4NY46_BATDJ	F4NRF2	F4NY46	Uncharacterized protein.	Uncharacterized protein.	0.822
F4NRF2_BATDJ	F4NYT4_BATDJ	F4NRF2	F4NYT4	Uncharacterized protein.	F-box domain-containing protein.	0.720
F4NRF2_BATDJ	F4NZL6_BATDJ	F4NRF2	F4NZL6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.623
F4NRF2_BATDJ	F4P0N8_BATDJ	F4NRF2	F4P0N8	Uncharacterized protein.	Uncharacterized protein.	0.888
F4NRF2_BATDJ	F4P0V3_BATDJ	F4NRF2	F4P0V3	Uncharacterized protein.	Uncharacterized protein.	0.755
F4NRF2_BATDJ	F4P0Y6_BATDJ	F4NRF2	F4P0Y6	Uncharacterized protein.	Uncharacterized protein.	0.769
F4NRF2_BATDJ	F4P1Q3_BATDJ	F4NRF2	F4P1Q3	Uncharacterized protein.	Uncharacterized protein.	0.901
F4NRF2_BATDJ	F4P2M4_BATDJ	F4NRF2	F4P2M4	Uncharacterized protein.	Dynein light chain roadblock.	0.813
F4NRF2_BATDJ	F4P3Q5_BATDJ	F4NRF2	F4P3Q5	Uncharacterized protein.	Uncharacterized protein.	0.627
F4NRF2_BATDJ	F4P3U0_BATDJ	F4NRF2	F4P3U0	Uncharacterized protein.	Uncharacterized protein.	0.768
F4NRF2_BATDJ	F4P414_BATDJ	F4NRF2	F4P414	Uncharacterized protein.	Uncharacterized protein.	0.889
F4NRF2_BATDJ	F4P415_BATDJ	F4NRF2	F4P415	Uncharacterized protein.	Dynein_C domain-containing protein.	0.720
F4NRF2_BATDJ	F4P477_BATDJ	F4NRF2	F4P477	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.770