21 items (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4P5H5_BATDJ	Uncharacterized protein. (517 aa)
	F4P8I7_BATDJ	Uncharacterized protein. (995 aa)
	F4P8N1_BATDJ	Uncharacterized protein. (198 aa)
	F4PA60_BATDJ	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (481 aa)
	F4PB75_BATDJ	KxDL domain-containing protein. (119 aa)
	F4NUC0_BATDJ	Uncharacterized protein. (224 aa)
	F4NUY4_BATDJ	Uncharacterized protein. (288 aa)
	F4NV36_BATDJ	Uncharacterized protein. (747 aa)
	F4NVC1_BATDJ	Ubiquitin-like domain-containing protein. (182 aa)
	F4NVD4_BATDJ	Uncharacterized protein; Belongs to the AAA ATPase family. (531 aa)
	F4NWH7_BATDJ	Expressed protein. (562 aa)
	F4NXZ7_BATDJ	AAA domain-containing protein. (679 aa)
	F4NYG5_BATDJ	Uncharacterized protein. (562 aa)
	F4NZH9_BATDJ	Uncharacterized protein. (371 aa)
	F4P187_BATDJ	Polyubiquitin. (305 aa)
	F4P1W9_BATDJ	Uncharacterized protein. (378 aa)
	F4P3A4_BATDJ	AAA domain-containing protein; Belongs to the AAA ATPase family. (260 aa)
	F4P4I1_BATDJ	Uncharacterized protein. (685 aa)
	F4PDX4_BATDJ	Uncharacterized protein. (454 aa)
	F4PE91_BATDJ	PRKCSH domain-containing protein. (477 aa)
	F4PF35_BATDJ	Uncharacterized protein. (351 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NUC0_BATDJ	F4NV36_BATDJ	F4NUC0	F4NV36	Uncharacterized protein.	Uncharacterized protein.	0.721
F4NUC0_BATDJ	F4NVD4_BATDJ	F4NUC0	F4NVD4	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.721
F4NUC0_BATDJ	F4NWH7_BATDJ	F4NUC0	F4NWH7	Uncharacterized protein.	Expressed protein.	0.805
F4NUC0_BATDJ	F4NXZ7_BATDJ	F4NUC0	F4NXZ7	Uncharacterized protein.	AAA domain-containing protein.	0.721
F4NUC0_BATDJ	F4NZH9_BATDJ	F4NUC0	F4NZH9	Uncharacterized protein.	Uncharacterized protein.	0.647
F4NUC0_BATDJ	F4P187_BATDJ	F4NUC0	F4P187	Uncharacterized protein.	Polyubiquitin.	0.547
F4NUC0_BATDJ	F4P1W9_BATDJ	F4NUC0	F4P1W9	Uncharacterized protein.	Uncharacterized protein.	0.537
F4NUC0_BATDJ	F4P3A4_BATDJ	F4NUC0	F4P3A4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.721
F4NUC0_BATDJ	F4P8I7_BATDJ	F4NUC0	F4P8I7	Uncharacterized protein.	Uncharacterized protein.	0.489
F4NUC0_BATDJ	F4PE91_BATDJ	F4NUC0	F4PE91	Uncharacterized protein.	PRKCSH domain-containing protein.	0.805
F4NUY4_BATDJ	F4NV36_BATDJ	F4NUY4	F4NV36	Uncharacterized protein.	Uncharacterized protein.	0.721
F4NUY4_BATDJ	F4NVD4_BATDJ	F4NUY4	F4NVD4	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.721
F4NUY4_BATDJ	F4NWH7_BATDJ	F4NUY4	F4NWH7	Uncharacterized protein.	Expressed protein.	0.805
F4NUY4_BATDJ	F4NXZ7_BATDJ	F4NUY4	F4NXZ7	Uncharacterized protein.	AAA domain-containing protein.	0.721
F4NUY4_BATDJ	F4P187_BATDJ	F4NUY4	F4P187	Uncharacterized protein.	Polyubiquitin.	0.570
F4NUY4_BATDJ	F4P3A4_BATDJ	F4NUY4	F4P3A4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.721
F4NUY4_BATDJ	F4P8I7_BATDJ	F4NUY4	F4P8I7	Uncharacterized protein.	Uncharacterized protein.	0.448
F4NUY4_BATDJ	F4PE91_BATDJ	F4NUY4	F4PE91	Uncharacterized protein.	PRKCSH domain-containing protein.	0.805
F4NV36_BATDJ	F4NUC0_BATDJ	F4NV36	F4NUC0	Uncharacterized protein.	Uncharacterized protein.	0.721
F4NV36_BATDJ	F4NUY4_BATDJ	F4NV36	F4NUY4	Uncharacterized protein.	Uncharacterized protein.	0.721