20 items (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4PB75_BATDJ	KxDL domain-containing protein. (119 aa)
	F4PAH3_BATDJ	Expressed protein. (333 aa)
	F4P9H8_BATDJ	Phorbol-ester/DAG-type domain-containing protein. (156 aa)
	F4P8K8_BATDJ	SH3 domain-containing protein. (626 aa)
	F4P6W8_BATDJ	Uncharacterized protein. (238 aa)
	F4P461_BATDJ	SH3 domain-containing protein. (549 aa)
	F4P3L0_BATDJ	WD_REPEATS_REGION domain-containing protein. (315 aa)
	F4NW98_BATDJ	Ncstrn_small domain-containing protein. (651 aa)
	F4NXR0_BATDJ	Uncharacterized protein. (527 aa)
	F4NZG1_BATDJ	SH3 domain-containing protein. (154 aa)
	F4P187_BATDJ	Polyubiquitin. (305 aa)
	F4NZK7_BATDJ	Uncharacterized protein. (270 aa)
	F4NRE6_BATDJ	Expressed protein. (794 aa)
	F4NSI7_BATDJ	Uncharacterized protein. (617 aa)
	F4NTR2_BATDJ	Uncharacterized protein. (839 aa)
	F4NVC1_BATDJ	Ubiquitin-like domain-containing protein. (182 aa)
	F4PE86_BATDJ	Uncharacterized protein. (191 aa)
	F4PE27_BATDJ	Uncharacterized protein. (192 aa)
	F4PBC1_BATDJ	Uncharacterized protein. (924 aa)
	F4PBC0_BATDJ	Uncharacterized protein. (1089 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NRE6_BATDJ	F4NTR2_BATDJ	F4NRE6	F4NTR2	Expressed protein.	Uncharacterized protein.	0.572
F4NRE6_BATDJ	F4NZG1_BATDJ	F4NRE6	F4NZG1	Expressed protein.	SH3 domain-containing protein.	0.572
F4NRE6_BATDJ	F4P461_BATDJ	F4NRE6	F4P461	Expressed protein.	SH3 domain-containing protein.	0.572
F4NRE6_BATDJ	F4P8K8_BATDJ	F4NRE6	F4P8K8	Expressed protein.	SH3 domain-containing protein.	0.572
F4NRE6_BATDJ	F4P9H8_BATDJ	F4NRE6	F4P9H8	Expressed protein.	Phorbol-ester/DAG-type domain-containing protein.	0.691
F4NRE6_BATDJ	F4PAH3_BATDJ	F4NRE6	F4PAH3	Expressed protein.	Expressed protein.	0.572
F4NRE6_BATDJ	F4PE27_BATDJ	F4NRE6	F4PE27	Expressed protein.	Uncharacterized protein.	0.762
F4NRE6_BATDJ	F4PE86_BATDJ	F4NRE6	F4PE86	Expressed protein.	Uncharacterized protein.	0.762
F4NTR2_BATDJ	F4NRE6_BATDJ	F4NTR2	F4NRE6	Uncharacterized protein.	Expressed protein.	0.572
F4NTR2_BATDJ	F4P9H8_BATDJ	F4NTR2	F4P9H8	Uncharacterized protein.	Phorbol-ester/DAG-type domain-containing protein.	0.607
F4NTR2_BATDJ	F4PE27_BATDJ	F4NTR2	F4PE27	Uncharacterized protein.	Uncharacterized protein.	0.601
F4NTR2_BATDJ	F4PE86_BATDJ	F4NTR2	F4PE86	Uncharacterized protein.	Uncharacterized protein.	0.601
F4NVC1_BATDJ	F4NXR0_BATDJ	F4NVC1	F4NXR0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.592
F4NVC1_BATDJ	F4P187_BATDJ	F4NVC1	F4P187	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.996
F4NVC1_BATDJ	F4P3L0_BATDJ	F4NVC1	F4P3L0	Ubiquitin-like domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
F4NVC1_BATDJ	F4P9H8_BATDJ	F4NVC1	F4P9H8	Ubiquitin-like domain-containing protein.	Phorbol-ester/DAG-type domain-containing protein.	0.625
F4NVC1_BATDJ	F4PB75_BATDJ	F4NVC1	F4PB75	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.831
F4NVC1_BATDJ	F4PE27_BATDJ	F4NVC1	F4PE27	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.696
F4NVC1_BATDJ	F4PE86_BATDJ	F4NVC1	F4PE86	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.696
F4NW98_BATDJ	F4NZK7_BATDJ	F4NW98	F4NZK7	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.991