7 items (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4NXP5_BATDJ	Uncharacterized protein. (227 aa)
	F4NYW2_BATDJ	ELMO domain-containing protein. (877 aa)
	F4P187_BATDJ	Polyubiquitin. (305 aa)
	F4PB75_BATDJ	KxDL domain-containing protein. (119 aa)
	F4P8E5_BATDJ	RRM domain-containing protein. (1143 aa)
	F4NU19_BATDJ	ELMO domain-containing protein. (168 aa)
	F4NVC1_BATDJ	Ubiquitin-like domain-containing protein. (182 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NVC1_BATDJ	F4P187_BATDJ	F4NVC1	F4P187	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.996
F4NVC1_BATDJ	F4PB75_BATDJ	F4NVC1	F4PB75	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.831
F4NXP5_BATDJ	F4NYW2_BATDJ	F4NXP5	F4NYW2	Uncharacterized protein.	ELMO domain-containing protein.	0.628
F4NYW2_BATDJ	F4NXP5_BATDJ	F4NYW2	F4NXP5	ELMO domain-containing protein.	Uncharacterized protein.	0.628
F4P187_BATDJ	F4NVC1_BATDJ	F4P187	F4NVC1	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.996
F4P187_BATDJ	F4PB75_BATDJ	F4P187	F4PB75	Polyubiquitin.	KxDL domain-containing protein.	0.683
F4PB75_BATDJ	F4NVC1_BATDJ	F4PB75	F4NVC1	KxDL domain-containing protein.	Ubiquitin-like domain-containing protein.	0.831
F4PB75_BATDJ	F4P187_BATDJ	F4PB75	F4P187	KxDL domain-containing protein.	Polyubiquitin.	0.683