4 items (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4P8K6_BATDJ	Uncharacterized protein. (2110 aa)
	F4P2U9_BATDJ	Uncharacterized protein. (684 aa)
	F4P4T4_BATDJ	Phosphodiesterase. (460 aa)
	F4P8H2_BATDJ	Guanylate cyclase domain-containing protein. (1036 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4P2U9_BATDJ	F4P4T4_BATDJ	F4P2U9	F4P4T4	Uncharacterized protein.	Phosphodiesterase.	0.825
F4P2U9_BATDJ	F4P8H2_BATDJ	F4P2U9	F4P8H2	Uncharacterized protein.	Guanylate cyclase domain-containing protein.	0.859
F4P2U9_BATDJ	F4P8K6_BATDJ	F4P2U9	F4P8K6	Uncharacterized protein.	Uncharacterized protein.	0.559
F4P4T4_BATDJ	F4P2U9_BATDJ	F4P4T4	F4P2U9	Phosphodiesterase.	Uncharacterized protein.	0.825
F4P4T4_BATDJ	F4P8K6_BATDJ	F4P4T4	F4P8K6	Phosphodiesterase.	Uncharacterized protein.	0.420
F4P8H2_BATDJ	F4P2U9_BATDJ	F4P8H2	F4P2U9	Guanylate cyclase domain-containing protein.	Uncharacterized protein.	0.859
F4P8H2_BATDJ	F4P8K6_BATDJ	F4P8H2	F4P8K6	Guanylate cyclase domain-containing protein.	Uncharacterized protein.	0.420
F4P8K6_BATDJ	F4P2U9_BATDJ	F4P8K6	F4P2U9	Uncharacterized protein.	Uncharacterized protein.	0.559
F4P8K6_BATDJ	F4P4T4_BATDJ	F4P8K6	F4P4T4	Uncharacterized protein.	Phosphodiesterase.	0.420
F4P8K6_BATDJ	F4P8H2_BATDJ	F4P8K6	F4P8H2	Uncharacterized protein.	Guanylate cyclase domain-containing protein.	0.420