STRINGSTRING
A0A067S478 A0A067S478 A0A067SDA8 A0A067SDA8 A0A067SKZ0 A0A067SKZ0 A0A067SNQ3 A0A067SNQ3 A0A067STW0 A0A067STW0 A0A067SXS6 A0A067SXS6 A0A067T0J3 A0A067T0J3 A0A067T273 A0A067T273 A0A067T7M1 A0A067T7M1 A0A067T8E8 A0A067T8E8 LSM4 LSM4 A0A067T9L6 A0A067T9L6 A0A067TAU9 A0A067TAU9 LSM8 LSM8 A0A067TBA8 A0A067TBA8 A0A067TBE8 A0A067TBE8 A0A067TBQ0 A0A067TBQ0 A0A067TDY0 A0A067TDY0 A0A067TF89 A0A067TF89 A0A067TGR0 A0A067TGR0 A0A067TJD1 A0A067TJD1 A0A067TJE1 A0A067TJE1 A0A067TK13 A0A067TK13 A0A067TK45 A0A067TK45 A0A067TL20 A0A067TL20 A0A067TLD4 A0A067TLD4 A0A067TLW2 A0A067TLW2 A0A067TN78 A0A067TN78 A0A067TNN8 A0A067TNN8 A0A067TPQ1 A0A067TPQ1 A0A067TQA0 A0A067TQA0 A0A067TR18 A0A067TR18 LSM5 LSM5 A0A067TSG0 A0A067TSG0 A0A067TSG1 A0A067TSG1 A0A067TSG9 A0A067TSG9 A0A067TT35 A0A067TT35 A0A067TUN0 A0A067TUN0 A0A067TV25 A0A067TV25 A0A067TVL1 A0A067TVL1 A0A067TWD1 A0A067TWD1 A0A067TXZ6 A0A067TXZ6 LSM3 LSM3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A067S478Uncharacterized protein. (99 aa)
A0A067SDA8Sm domain-containing protein. (165 aa)
A0A067SKZ0Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
A0A067SNQ3TPR_REGION domain-containing protein. (924 aa)
A0A067STW0Uncharacterized protein. (750 aa)
A0A067SXS6U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
A0A067T0J3Small nuclear ribonucleoprotein Sm D3. (127 aa)
A0A067T273RRM domain-containing protein. (391 aa)
A0A067T7M1Sm domain-containing protein. (103 aa)
A0A067T8E8Uncharacterized protein. (785 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
A0A067T9L6Uncharacterized protein. (2164 aa)
A0A067TAU9Sm domain-containing protein. (142 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A067TBA8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (127 aa)
A0A067TBE8SF3b1 domain-containing protein. (1155 aa)
A0A067TBQ0Uncharacterized protein. (110 aa)
A0A067TDY0Uncharacterized protein. (458 aa)
A0A067TF89Uncharacterized protein. (267 aa)
A0A067TGR0Uncharacterized protein; Belongs to the DEAD box helicase family. (752 aa)
A0A067TJD1Uncharacterized protein. (197 aa)
A0A067TJE1Sm domain-containing protein. (83 aa)
A0A067TK13Nop domain-containing protein. (549 aa)
A0A067TK45Uncharacterized protein; Belongs to the DEAD box helicase family. (682 aa)
A0A067TL20U1-type domain-containing protein. (536 aa)
A0A067TLD4WD_REPEATS_REGION domain-containing protein. (508 aa)
A0A067TLW2Uncharacterized protein. (611 aa)
A0A067TN78PSP domain-containing protein. (583 aa)
A0A067TNN8Uncharacterized protein. (247 aa)
A0A067TPQ1Small nuclear ribonucleoprotein Sm D2. (111 aa)
A0A067TQA0Matrin-type domain-containing protein. (223 aa)
A0A067TR18Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (85 aa)
A0A067TSG0Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
A0A067TSG1CPSF_A domain-containing protein. (1213 aa)
A0A067TSG9Uncharacterized protein. (315 aa)
A0A067TT35Uncharacterized protein. (161 aa)
A0A067TUN0Uncharacterized protein. (1027 aa)
A0A067TV25Uncharacterized protein. (255 aa)
A0A067TVL1U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (208 aa)
A0A067TWD1Small nuclear ribonucleoprotein G. (78 aa)
A0A067TXZ6RRM domain-containing protein. (122 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
Your Current Organism:
Galerina marginata
NCBI taxonomy Id: 685588
Other names: G. marginata CBS 339.88, Galerina marginata CBS 339.88
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