(21 nodes) Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and Photosynthesis - antenna proteins network (Pedobacter ginsenosidimutans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KRT17965.1	Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
	KRT15809.1	Large multifunctional protein- glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	KRT15332.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	KRT14710.1	Sulfatase-modifying factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	KRT14711.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	KRT14712.1	Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (336 aa)
	KRT14713.1	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	KRT14733.1	Hyaluronate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	KRT14840.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	KRT14734.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	KRT13936.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	ASU31_22465	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	KRT13631.1	NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	KRT13489.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	KRT13368.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	KRT13381.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	KRT13040.1	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	KRT13031.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (972 aa)
	KRT13032.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	KRT13033.1	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	KRT13034.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)

Your Current Organism:

Pedobacter ginsenosidimutans

NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASU31_22465	KRT13031.1	ASU31_22465	ASU31_26700	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
ASU31_22465	KRT13034.1	ASU31_22465	ASU31_26715	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
ASU31_22465	KRT13631.1	ASU31_22465	ASU31_23565	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
ASU31_22465	KRT14711.1	ASU31_22465	ASU31_17560	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
ASU31_22465	KRT15332.1	ASU31_22465	ASU31_14995	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
KRT13031.1	ASU31_22465	ASU31_26700	ASU31_22465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KRT13031.1	KRT13032.1	ASU31_26700	ASU31_26705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
KRT13031.1	KRT13033.1	ASU31_26700	ASU31_26710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KRT13031.1	KRT13034.1	ASU31_26700	ASU31_26715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KRT13031.1	KRT13040.1	ASU31_26700	ASU31_26695	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
KRT13031.1	KRT13489.1	ASU31_26700	ASU31_24235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
KRT13031.1	KRT13631.1	ASU31_26700	ASU31_23565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
KRT13031.1	KRT14710.1	ASU31_26700	ASU31_17555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfatase-modifying factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
KRT13031.1	KRT14711.1	ASU31_26700	ASU31_17560	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
KRT13031.1	KRT15332.1	ASU31_26700	ASU31_14995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
KRT13032.1	KRT13031.1	ASU31_26705	ASU31_26700	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
KRT13032.1	KRT13033.1	ASU31_26705	ASU31_26710	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
KRT13032.1	KRT13034.1	ASU31_26705	ASU31_26715	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KRT13032.1	KRT13040.1	ASU31_26705	ASU31_26695	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
KRT13032.1	KRT14711.1	ASU31_26705	ASU31_17560	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527

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