STRINGSTRING
KRT14038.1 KRT14038.1 KRT14002.1 KRT14002.1 KRT13429.1 KRT13429.1 KRT13432.1 KRT13432.1 KRT13146.1 KRT13146.1 KRT15922.1 KRT15922.1 KRT18053.1 KRT18053.1 KRT15302.1 KRT15302.1 KRT14833.1 KRT14833.1 KRT14122.1 KRT14122.1 KRT16865.1 KRT16865.1 KRT17026.1 KRT17026.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT14038.1Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
KRT14002.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (390 aa)
KRT13429.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KRT13432.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (383 aa)
KRT13146.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
KRT15922.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (373 aa)
KRT18053.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
KRT15302.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (349 aa)
KRT14833.1L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (102 aa)
KRT14122.1Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. (223 aa)
KRT16865.1UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)
KRT17026.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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