STRINGSTRING
KRT15139.1 KRT15139.1 KRT16219.1 KRT16219.1 KRT16224.1 KRT16224.1 KRT15922.1 KRT15922.1 KRT15751.1 KRT15751.1 KRT15815.1 KRT15815.1 galK galK KRT15302.1 KRT15302.1 KRT15208.1 KRT15208.1 KRT15100.1 KRT15100.1 pgi pgi KRT14833.1 KRT14833.1 gpmI gpmI ASU31_21080 ASU31_21080 KRT14094.1 KRT14094.1 galK-2 galK-2 KRT14002.1 KRT14002.1 KRT13883.1 KRT13883.1 KRT13823.1 KRT13823.1 zwf zwf KRT13611.1 KRT13611.1 KRT13674.1 KRT13674.1 KRT17853.1 KRT17853.1 KRT16865.1 KRT16865.1 KRT16935.1 KRT16935.1 KRT17026.1 KRT17026.1 pckA pckA KRT13095.1 KRT13095.1 KRT13146.1 KRT13146.1 KRT13187.1 KRT13187.1 pckA-2 pckA-2 KRT13432.1 KRT13432.1 KRT13429.1 KRT13429.1 fbp fbp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT15139.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
KRT16219.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
KRT16224.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
KRT15922.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (373 aa)
KRT15751.1Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa)
KRT15815.1Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa)
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (388 aa)
KRT15302.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (349 aa)
KRT15208.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)
KRT15100.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (475 aa)
pgiGlucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (548 aa)
KRT14833.1L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (102 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (507 aa)
ASU31_21080Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 35 family. (613 aa)
KRT14094.1Galactose-1-phosphate uridylyltransferase; Catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (353 aa)
galK-2Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (383 aa)
KRT14002.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (390 aa)
KRT13883.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
KRT13823.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 35 family. (794 aa)
zwfGlucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (504 aa)
KRT13611.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 35 family. (613 aa)
KRT13674.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
KRT17853.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (377 aa)
KRT16865.1UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)
KRT16935.16-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
KRT17026.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (531 aa)
KRT13095.1Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KRT13146.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
KRT13187.1Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
pckA-2Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (530 aa)
KRT13432.1Aldose epimerase; Converts alpha-aldose to the beta-anomer. (383 aa)
KRT13429.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
fbpFructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family. (359 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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