STRINGSTRING
KRT13058.1 KRT13058.1 KRT18106.1 KRT18106.1 KRT14089.1 KRT14089.1 KRT13971.1 KRT13971.1 KRT13555.1 KRT13555.1 KRT13396.1 KRT13396.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT13058.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
KRT18106.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0173 family. (225 aa)
KRT14089.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
KRT13971.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KRT13555.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
KRT13396.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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