STRINGSTRING
KRT14339.1 KRT14339.1 purU purU KRT17201.1 KRT17201.1 KRT17347.1 KRT17347.1 KRT16269.1 KRT16269.1 KRT14775.1 KRT14775.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT14339.1Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (279 aa)
KRT17201.1Bifunctional aspartokinase I/homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (817 aa)
KRT17347.1Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
KRT16269.1Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
KRT14775.1MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (735 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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