STRINGSTRING
KRT18041.1 KRT18041.1 KRT18042.1 KRT18042.1 KRT17614.1 KRT17614.1 KRT17663.1 KRT17663.1 lpxD lpxD KRT16663.1 KRT16663.1 KRT16121.1 KRT16121.1 KRT15848.1 KRT15848.1 glgC glgC KRT14522.1 KRT14522.1 ASU31_19750 ASU31_19750 KRT14176.1 KRT14176.1 KRT13873.1 KRT13873.1 KRT13455.1 KRT13455.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT18041.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
KRT18042.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
KRT17614.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
KRT17663.1UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (261 aa)
lpxDUDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (358 aa)
KRT16663.1Maltose acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
KRT16121.12,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family. (272 aa)
KRT15848.1Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
glgCGlucose-1-phosphate adenylyltransferase; Catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
KRT14522.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
ASU31_19750Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
KRT14176.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
KRT13873.1Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
KRT13455.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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