STRINGSTRING
KRT14525.1 KRT14525.1 KRT14270.1 KRT14270.1 KRT13995.1 KRT13995.1 KRT13631.1 KRT13631.1 KRT13664.1 KRT13664.1 KRT13657.1 KRT13657.1 KRT17026.1 KRT17026.1 KRT17412.1 KRT17412.1 KRT16798.1 KRT16798.1 KRT16274.1 KRT16274.1 KRT15703.1 KRT15703.1 KRT15381.1 KRT15381.1 KRT15477.1 KRT15477.1 KRT15152.1 KRT15152.1 KRT14866.1 KRT14866.1 KRT14999.1 KRT14999.1 KRT14833.1 KRT14833.1 KRT14573.1 KRT14573.1 KRT13091.1 KRT13091.1 KRT13146.1 KRT13146.1 KRT13379.1 KRT13379.1 KRT13429.1 KRT13429.1 KRT13497.1 KRT13497.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT14525.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
KRT14270.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
KRT13995.1Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
KRT13631.1NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
KRT13664.1Stress responsive alpha-beta barrel domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
KRT13657.1Spheroidene monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
KRT17026.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
KRT17412.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
KRT16798.1Transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
KRT16274.1Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
KRT15703.1GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
KRT15381.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
KRT15477.1Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
KRT15152.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
KRT14866.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
KRT14999.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
KRT14833.1L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (102 aa)
KRT14573.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
KRT13091.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
KRT13146.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
KRT13379.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (836 aa)
KRT13429.1L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KRT13497.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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