STRINGSTRING
KRT16791.1 KRT16791.1 KRT16385.1 KRT16385.1 KRT14711.1 KRT14711.1 KRT14380.1 KRT14380.1 KRT14385.1 KRT14385.1 KRT14390.1 KRT14390.1 KRT13381.1 KRT13381.1 KRT17228.1 KRT17228.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT16791.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
KRT16385.1Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
KRT14711.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
KRT14380.1Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
KRT14385.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
KRT14390.1Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
KRT13381.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
KRT17228.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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