STRINGSTRING
KRT13434.1 KRT13434.1 KRT16798.1 KRT16798.1 KRT16611.1 KRT16611.1 KRT17418.1 KRT17418.1 KRT17414.1 KRT17414.1 KRT17384.1 KRT17384.1 KRT17375.1 KRT17375.1 KRT17263.1 KRT17263.1 ASU31_06095 ASU31_06095 KRT17236.1 KRT17236.1 KRT17229.1 KRT17229.1 KRT17042.1 KRT17042.1 KRT18118.1 KRT18118.1 KRT18064.1 KRT18064.1 KRT17995.1 KRT17995.1 KRT17993.1 KRT17993.1 KRT17944.1 KRT17944.1 KRT17866.1 KRT17866.1 KRT17863.1 KRT17863.1 KRT17832.1 KRT17832.1 KRT18200.1 KRT18200.1 KRT17797.1 KRT17797.1 KRT17760.1 KRT17760.1 KRT15494.1 KRT15494.1 KRT15506.1 KRT15506.1 KRT15315.1 KRT15315.1 KRT15345.1 KRT15345.1 KRT15131.1 KRT15131.1 KRT15170.1 KRT15170.1 KRT14867.1 KRT14867.1 KRT14921.1 KRT14921.1 KRT14971.1 KRT14971.1 KRT14708.1 KRT14708.1 KRT14765.1 KRT14765.1 KRT14776.1 KRT14776.1 KRT14656.1 KRT14656.1 KRT14573.1 KRT14573.1 KRT14509.1 KRT14509.1 KRT14451.1 KRT14451.1 KRT14270.1 KRT14270.1 KRT14271.1 KRT14271.1 priA priA KRT14193.1 KRT14193.1 KRT14195.1 KRT14195.1 KRT14197.1 KRT14197.1 KRT14174.1 KRT14174.1 KRT14093.1 KRT14093.1 ASU31_21405 ASU31_21405 KRT13987.1 KRT13987.1 KRT14019.1 KRT14019.1 KRT13956.1 KRT13956.1 KRT13770.1 KRT13770.1 KRT13786.1 KRT13786.1 KRT13742.1 KRT13742.1 KRT13727.1 KRT13727.1 KRT13682.1 KRT13682.1 KRT13583.1 KRT13583.1 KRT13595.1 KRT13595.1 KRT13497.1 KRT13497.1 KRT13475.1 KRT13475.1 KRT16823.1 KRT16823.1 KRT13395.1 KRT13395.1 KRT13399.1 KRT13399.1 KRT13376.1 KRT13376.1 KRT13309.1 KRT13309.1 KRT13323.1 KRT13323.1 KRT13326.1 KRT13326.1 KRT13289.1 KRT13289.1 KRT13248.1 KRT13248.1 KRT13259.1 KRT13259.1 KRT13220.1 KRT13220.1 KRT13087.1 KRT13087.1 KRT13091.1 KRT13091.1 ruvB ruvB KRT13064.1 KRT13064.1 KRT13039.1 KRT13039.1 KRT15768.1 KRT15768.1 KRT15754.1 KRT15754.1 KRT15748.1 KRT15748.1 KRT15737.1 KRT15737.1 KRT15683.1 KRT15683.1 KRT16173.1 KRT16173.1 KRT16094.1 KRT16094.1 KRT16188.1 KRT16188.1 KRT16536.1 KRT16536.1 KRT16231.1 KRT16231.1 KRT15471.1 KRT15471.1 KRT15446.1 KRT15446.1 KRT15407.1 KRT15407.1 KRT15381.1 KRT15381.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT13434.1DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
KRT16798.1Transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
KRT16611.1CopY family transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
KRT17418.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (297 aa)
KRT17414.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
KRT17384.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
KRT17375.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
KRT17263.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
ASU31_06095ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
KRT17236.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
KRT17229.1ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
KRT17042.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
KRT18118.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (310 aa)
KRT18064.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GbsR family. (168 aa)
KRT17995.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
KRT17993.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
KRT17944.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
KRT17866.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
KRT17863.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (315 aa)
KRT17832.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
KRT18200.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KRT17797.1Transcriptional regulator, hxlr family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
KRT17760.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
KRT15494.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
KRT15506.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (288 aa)
KRT15315.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
KRT15345.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
KRT15131.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
KRT15170.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
KRT14867.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
KRT14921.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
KRT14971.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
KRT14708.1Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
KRT14765.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
KRT14776.1Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (165 aa)
KRT14656.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (298 aa)
KRT14573.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
KRT14509.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
KRT14451.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa)
KRT14270.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
KRT14271.1Iron-dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (826 aa)
KRT14193.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
KRT14195.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
KRT14197.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
KRT14174.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
KRT14093.1DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
ASU31_21405GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
KRT13987.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
KRT14019.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
KRT13956.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
KRT13770.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
KRT13786.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
KRT13742.1DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
KRT13727.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
KRT13682.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
KRT13583.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
KRT13595.1Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KRT13497.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
KRT13475.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
KRT16823.1DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
KRT13395.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KRT13399.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
KRT13376.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
KRT13309.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
KRT13323.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
KRT13326.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
KRT13289.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
KRT13248.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family. (216 aa)
KRT13259.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KRT13220.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
KRT13087.1Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (188 aa)
KRT13091.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
ruvBATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (340 aa)
KRT13064.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
KRT13039.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
KRT15768.1Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (145 aa)
KRT15754.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
KRT15748.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
KRT15737.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
KRT15683.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
KRT16173.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
KRT16094.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
KRT16188.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
KRT16536.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
KRT16231.1ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
KRT15471.1Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (864 aa)
KRT15446.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
KRT15407.1Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
KRT15381.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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