STRINGSTRING
KRT17937.1 KRT17937.1 KRT18089.1 KRT18089.1 KRT17513.1 KRT17513.1 metE metE KRT16847.1 KRT16847.1 ahcY ahcY KRT17159.1 KRT17159.1 KRT17161.1 KRT17161.1 KRT17201.1 KRT17201.1 KRT17209.1 KRT17209.1 KRT17248.1 KRT17248.1 KRT17343.1 KRT17343.1 KRT17347.1 KRT17347.1 metK metK KRT16648.1 KRT16648.1 rsmA rsmA KRT16690.1 KRT16690.1 KRT16711.1 KRT16711.1 ilvE ilvE KRT16042.1 KRT16042.1 KRT16083.1 KRT16083.1 mdh mdh serC serC KRT15454.1 KRT15454.1 KRT15277.1 KRT15277.1 KRT15100.1 KRT15100.1 metZ metZ KRT14757.1 KRT14757.1 KRT14760.1 KRT14760.1 KRT14805.1 KRT14805.1 KRT14572.1 KRT14572.1 asd asd KRT14347.1 KRT14347.1 serC-2 serC-2 KRT14154.1 KRT14154.1 KRT14059.1 KRT14059.1 KRT14078.1 KRT14078.1 cysM cysM KRT13873.1 KRT13873.1 KRT13805.1 KRT13805.1 KRT13721.1 KRT13721.1 KRT13656.1 KRT13656.1 KRT13455.1 KRT13455.1 KRT13087.1 KRT13087.1 KRT13025.1 KRT13025.1 KRT13027.1 KRT13027.1 metXA metXA KRT13001.1 KRT13001.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT17937.1Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
KRT18089.1Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MurCDEF family. (871 aa)
KRT17513.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (777 aa)
KRT16847.1CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (438 aa)
KRT17159.1Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
KRT17161.1GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
KRT17201.1Bifunctional aspartokinase I/homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (817 aa)
KRT17209.1Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1233 aa)
KRT17248.1Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (308 aa)
KRT17343.1Branched chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
KRT17347.1Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
metKS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (416 aa)
KRT16648.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
rsmA16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (261 aa)
KRT16690.1Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
KRT16711.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (296 aa)
KRT16042.1PIN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
KRT16083.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (312 aa)
serC3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (365 aa)
KRT15454.1Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
KRT15277.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (437 aa)
KRT15100.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (475 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (388 aa)
KRT14757.14-amino-4-deoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
KRT14760.11-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
KRT14805.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
KRT14572.1Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (329 aa)
KRT14347.1Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
serC-23-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (357 aa)
KRT14154.13-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (315 aa)
KRT14059.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (422 aa)
KRT14078.1Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
cysMCysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
KRT13873.1Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
KRT13805.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
KRT13721.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
KRT13656.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
KRT13455.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
KRT13087.1Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (188 aa)
KRT13025.1Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
KRT13027.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
metXAHomoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (352 aa)
KRT13001.1Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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