STRINGSTRING
KRT17946.1 KRT17946.1 KRT17564.1 KRT17564.1 KRT16895.1 KRT16895.1 KRT16965.1 KRT16965.1 KRT17018.1 KRT17018.1 KRT17396.1 KRT17396.1 KRT16689.1 KRT16689.1 KRT16414.1 KRT16414.1 KRT16415.1 KRT16415.1 KRT16027.1 KRT16027.1 KRT15366.1 KRT15366.1 KRT15105.1 KRT15105.1 KRT14612.1 KRT14612.1 KRT14562.1 KRT14562.1 KRT14245.1 KRT14245.1 KRT14048.1 KRT14048.1 gltD gltD KRT13931.1 KRT13931.1 KRT13689.1 KRT13689.1 KRT13676.1 KRT13676.1 KRT13677.1 KRT13677.1 KRT13678.1 KRT13678.1 KRT13453.1 KRT13453.1 KRT13469.1 KRT13469.1 KRT13400.1 KRT13400.1 KRT13278.1 KRT13278.1 KRT13051.1 KRT13051.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRT17946.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
KRT17564.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
KRT16895.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
KRT16965.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (453 aa)
KRT17018.1Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
KRT17396.1Alpha-ketoglutarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
KRT16689.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
KRT16414.1Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
KRT16415.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
KRT16027.1Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (473 aa)
KRT15366.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
KRT15105.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
KRT14612.12-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
KRT14562.1Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
KRT14245.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1143 aa)
KRT14048.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
KRT13931.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1499 aa)
KRT13689.1Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (825 aa)
KRT13676.1Nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
KRT13677.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
KRT13678.1NAD(P)H-nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (1181 aa)
KRT13453.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (724 aa)
KRT13469.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (553 aa)
KRT13400.1Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (219 aa)
KRT13278.1Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
KRT13051.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
Your Current Organism:
Pedobacter ginsenosidimutans
NCBI taxonomy Id: 687842
Other names: JCM 16721, KACC 14530, P. ginsenosidimutans, Pedobacter ginsenosidimutans Yang et al. 2013, Pedobacter sp. THG-45, strain THG-45
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