STRINGSTRING
OCH18649.1 OCH18649.1 OCH22232.1 OCH22232.1 OCH22386.1 OCH22386.1 OCH18446.1 OCH18446.1 OCH17874.1 OCH17874.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OCH18649.1Universal stress protein UspB; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
OCH22232.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family. (107 aa)
OCH22386.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0304 family. (166 aa)
OCH18446.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
OCH17874.1Acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
Your Current Organism:
Aliivibrio logei
NCBI taxonomy Id: 688
Other names: A. logei, ATCC 29985, CCUG 20283, CIP 104991, LMG 21012, LMG:21012, NCIMB 2252, Photobacterium logei, Vibrio logei, strain 584
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