STRINGSTRING
GLE_0173 GLE_0173 GLE_0254 GLE_0254 GLE_2245 GLE_2245 GLE_2246 GLE_2246 GLE_2247 GLE_2247 GLE_2248 GLE_2248 GLE_2249 GLE_2249 GLE_2250 GLE_2250 GLE_2251 GLE_2251 nodL nodL GLE_2253 GLE_2253 wecC wecC GLE_2255 GLE_2255 GLE_2256 GLE_2256 epsB epsB GLE_2261 GLE_2261 GLE_2455 GLE_2455 GLE_2456 GLE_2456 GLE_2457 GLE_2457 GLE_2458 GLE_2458 GLE_2459 GLE_2459 GLE_2460 GLE_2460 GLE_2461 GLE_2461 GLE_2462 GLE_2462 GLE_2463 GLE_2463 GLE_2464 GLE_2464 GLE_2487 GLE_2487 ugd ugd galU galU GLE_2920 GLE_2920 GLE_3013 GLE_3013 GLE_3157 GLE_3157 rfbD rfbD rfbC rfbC rfbA rfbA rfbB rfbB GLE_3976 GLE_3976 manA manA GLE_4700 GLE_4700 GLE_4776 GLE_4776
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLE_0173NAD-dependent epimerase/dehydratase family protein. (321 aa)
GLE_0254Phosphomannomutase. (772 aa)
GLE_2245Hypothetical protein. (248 aa)
GLE_2246Glycosyl transferase, group 1 family protein. (418 aa)
GLE_2247Heparinase II/III family protein. (552 aa)
GLE_2248Oxidoreductase, zinc-binding dehydrogenase family/NAD-binding Rossmann fold. (718 aa)
GLE_2249Hypothetical protein. (271 aa)
GLE_2250Glycosyl transferase. (365 aa)
GLE_2251Membrane protein. (397 aa)
nodLNodulation protein L. (196 aa)
GLE_2253Polysaccharide biosynthesis protein. (431 aa)
wecCNDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)
GLE_2255UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (799 aa)
GLE_2256Hypothetical protein. (78 aa)
epsBTyrosine-protein kinase. (740 aa)
GLE_2261Polysaccharide biosynthesis/export protein. (365 aa)
GLE_2455Undecaprenyl-phosphate glucose phosphotransferase. (481 aa)
GLE_2456Hypothetical protein. (76 aa)
GLE_2457Polysaccharide biosynthesis/export protein. (237 aa)
GLE_2458Chain length determinant protein. (499 aa)
GLE_2459Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (397 aa)
GLE_2460Membrane protein. (432 aa)
GLE_2461Glycosyl transferase, group 1 family protein. (388 aa)
GLE_2462Glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family. (465 aa)
GLE_2463Hypothetical protein. (528 aa)
GLE_2464Glycosyl transferase, group 1 family protein. (384 aa)
GLE_2487UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (331 aa)
ugdUdp-glucose 6-dehydrogenase. (447 aa)
galUUTP-glucose-1-phosphate uridylyltransferase. (300 aa)
GLE_2920Epimerase/dehydratase. (633 aa)
GLE_3013NAD dependent epimerase/dehydratase family protein. (327 aa)
GLE_3157Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (358 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (305 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
rfbBdTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (350 aa)
GLE_3976Glycosyl transferase. (310 aa)
manAMannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (470 aa)
GLE_4700Rhamnosyltransferase. (337 aa)
GLE_4776Glycosyl transferase, group 2 family protein. (334 aa)
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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