STRINGSTRING
tssB-2 tssB-2 tssC-2 tssC-2 GLE_2574 GLE_2574 GLE_2575 GLE_2575 tssE-2 tssE-2 vasA-2 vasA-2 GLE_2578 GLE_2578
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tssB-2Type VI secretion protein, VC_A0107 family. (167 aa)
tssC-2Type VI secretion protein, EvpB/VC_A0108 family. (504 aa)
GLE_2574Hypothetical protein. (163 aa)
GLE_2575ImpE/SciE family protein. (280 aa)
tssE-2Type VI secretion system lysozyme-related protein. (167 aa)
vasA-2Type VI secretion protein, VC_A0110 family. (626 aa)
GLE_2578Type VI secretion protein, VC_A0111 family. (350 aa)
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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