Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TK0111 | TK0126 | TK0111 | TK0126 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Predicted transcription regulator, containing DNA-binding HTH domain. | 0.409 |
| TK0111 | TK1534 | TK0111 | TK1534 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Protein translation factor SUI1 homolog; Belongs to the SUI1 family. | 0.591 |
| TK0111 | TK1915 | TK0111 | TK1915 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L41E. | 0.863 |
| TK0111 | ef1b | TK0111 | TK0112 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Translation elongation factor EF-1, beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.988 |
| TK0111 | eif1a | TK0111 | TK0802 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.588 |
| TK0111 | eif5a | TK0111 | TK0878 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.415 |
| TK0111 | infB | TK0111 | TK1305 | Predicted zinc-ribbon RNA-binding protein involved in translation. | Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (By similarity). | 0.999 |
| TK0111 | rpl10e | TK0111 | TK1546 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L10E; Belongs to the universal ribosomal protein uL16 family. | 0.860 |
| TK0111 | rpl11 | TK0111 | TK1418 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.637 |
| TK0111 | rpl13 | TK0111 | TK1501 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.801 |
| TK0111 | rpl14 | TK0111 | TK1531 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.910 |
| TK0111 | rpl14e | TK0111 | TK1513 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L14E; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.947 |
| TK0111 | rpl15 | TK0111 | TK1519 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.851 |
| TK0111 | rpl15e | TK0111 | TK1454 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.926 |
| TK0111 | rpl18 | TK0111 | TK1522 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.835 |
| TK0111 | rpl18a | TK0111 | TK1322 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L20A. | 0.833 |
| TK0111 | rpl18e | TK0111 | TK1502 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.824 |
| TK0111 | rpl19e | TK0111 | TK1523 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.815 |
| TK0111 | rpl2 | TK0111 | TK1539 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.825 |
| TK0111 | rpl21e | TK0111 | TK0902 | Predicted zinc-ribbon RNA-binding protein involved in translation. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.884 |
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