STRINGSTRING
TK0684 TK0684 argF argF TK0977 TK0977 TK1406 TK1406 TK1436 TK1436 TK1768 TK1768 TK1769 TK1769 TK1770 TK1770 TK1771 TK1771 TK1772 TK1772 TK1773 TK1773 TK1774 TK1774 TK1775 TK1775 TK1776 TK1776 TK1809 TK1809 TK1884 TK1884 Tk-cgt Tk-cgt
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK0684Aromatic amino acid permease. (364 aa)
argFOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (315 aa)
TK0977Pullulanase type II, GH13 family. (765 aa)
TK1406Maltodextrin phosphorylase. (830 aa)
TK1436Probable alpha-amylase, GH57 family; Catalyzes the formation of branch points in alpha-glucans by cleavage of an alpha-1,4 glycosidic bond and subsequent transfer of the cleaved-off oligosaccharide to a new alpha-1,6 position. The branch chain-length distribution of the reaction products shows degree of polymerization (DP) of 5 to 30, with two local maxima at DP 6 and DP 11. Exhibits an alpha-retaining catalytic mechanism. Does not display alpha-galactosidase or pullulanase activity, since melibiose and pullulan are not substrates. Is not able to catalyze the hydrolysis or transglycosy [...] (675 aa)
TK1768Glycogen synthase. (448 aa)
TK1769Predicted transcription regulator, DUF118 helix-turn-helix family. (341 aa)
TK1770Cyclomaltodextrinase. (656 aa)
TK1771ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component. (448 aa)
TK1772ABC-type maltodextrin transport system, permease component. (300 aa)
TK1773ABC-type maltodextrin transport system, permease component. (414 aa)
TK1774Amylopullulanase, GH57 family. (1100 aa)
TK1775ABC-type maltdextrin transport system, ATPase component. (372 aa)
TK1776Hypothetical protein, conserved, UPF0146 family; Belongs to the UPF0146 family. (133 aa)
TK18094-alpha-Glucanotransferase, GH57 family. (653 aa)
TK1884Alpha-amylase precursor, GH13 family. (461 aa)
Tk-cgtCyclodextrin glucanotransferase, GH13 family. (713 aa)
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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