STRINGSTRING
TK0212 TK0212 TK0213 TK0213 TK0917 TK0917 TK0918 TK0918 TK1072 TK1072 TK1073 TK1073 TK1127 TK1127 TK1247 TK1247 TK1248 TK1248 TK1249 TK1249 TK1250 TK1250 TK1253 TK1253 TK1255 TK1255 vapC-8 vapC-8 TK1257 TK1257 TK1709 TK1709 TK1710 TK1710 TK1712 TK1712 TK1994 TK1994 TK2153 TK2153 TK2154 TK2154 TK2155 TK2155 TK2306 TK2306
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK0212Predicted nucleic acid-binding protein, containing PIN domain. (162 aa)
TK0213Hypothetical protein, conserved, UPF0175 family. (86 aa)
TK0917Hypothetical protein, conserved, UPF0175 family. (82 aa)
TK0918Hypothetical protein, conserved. (161 aa)
TK1072Hypothetical protein, conserved, DUF103 family. (137 aa)
TK1073Nucleotidyltransferase. (101 aa)
TK1127Hypothetical protein, conserved, DUF103 family. (131 aa)
TK1247Membrane-associated metallopeptidase, M50 family. (436 aa)
TK1248Hypothetical protein, conserved, DUF126 family; Belongs to the UPF0107 family. (133 aa)
TK1249Hypothetical protein, conserved, DUF521 family. (386 aa)
TK1250intein/rRNA intron-related DNA endonuclease. (304 aa)
TK1253Hypothetical protein, conserved. (85 aa)
TK1255Hypothetical protein, conserved. (82 aa)
vapC-8Predicted nucleic acid-binding protein, containing PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa)
TK1257RNA-binding protein, containing THUMP domain. (355 aa)
TK1709Nucleotidyltransferase. (135 aa)
TK1710Hypothetical protein, conserved, DUF86 family. (143 aa)
TK1712Capsular polysaccharide biosynthesis protein. (415 aa)
TK1994Nucleotidyltransferase. (108 aa)
TK2153Hypothetical protein, conserved. (98 aa)
TK2154Hypothetical protein, conserved, UPF0175 family. (90 aa)
TK2155Predicted nucleic acid-binding protein, containing PIN domain. (160 aa)
TK2306Predicted nucleic acid-binding protein, containing PIN domain. (158 aa)
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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