STRINGSTRING
TK1443 TK1443 TK0214 TK0214 lysY lysY TK0705 TK0705 gap gap TK2076 TK2076
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK1443Aspartate-semialdehyde dehydrogenase. (335 aa)
TK0214Probable formate dehydrogenase, alpha subunit. (659 aa)
lysYN2-acetyl-aminoadipyl-delta-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. (330 aa)
TK0705NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (non-phosphorylating); Belongs to the aldehyde dehydrogenase family. (507 aa)
gapGlyceraldehyde-3-phosphate dehydrogenase (phosphorylating). (334 aa)
TK2076Probable formate dehydrogenase, alpha subunit. (721 aa)
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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