Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TK0218 | TK1676 | TK0218 | TK1676 | Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Nicotinate-nucleotide pyrophosphorylase. | 0.987 |
| TK0218 | pdxS | TK0218 | TK0217 | Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Pyridoxine/pyridoxal 5-phosphate biosynthesis protein, SOR/SNZ family; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.565 |
| TK0268 | aroD | TK0268 | TK0266 | 2-dehydro-3-deoxyphosphoheptonate aldolase. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.876 |
| TK0268 | trpA | TK0268 | TK0258 | 2-dehydro-3-deoxyphosphoheptonate aldolase. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.456 |
| TK0268 | trpC | TK0268 | TK0252 | 2-dehydro-3-deoxyphosphoheptonate aldolase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.464 |
| TK0268 | trpF | TK0268 | TK0256 | 2-dehydro-3-deoxyphosphoheptonate aldolase. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.401 |
| TK0283 | TK0990 | TK0283 | TK0990 | Homocitrate synthase. | Oxaloacetate decarboxylase, alpha subunit. | 0.823 |
| TK0283 | hisA | TK0283 | TK0247 | Homocitrate synthase. | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase. | 0.666 |
| TK0283 | pyrD | TK0283 | TK2260 | Homocitrate synthase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.450 |
| TK0283 | tpiA | TK0283 | TK2129 | Homocitrate synthase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.542 |
| TK0283 | trpA | TK0283 | TK0258 | Homocitrate synthase. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.564 |
| TK0283 | trpC | TK0283 | TK0252 | Homocitrate synthase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.499 |
| TK0475 | tpiA | TK0475 | TK2129 | Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.457 |
| TK0720 | TK1676 | TK0720 | TK1676 | Hypothetical protein, conserved. | Nicotinate-nucleotide pyrophosphorylase. | 0.490 |
| TK0990 | TK0283 | TK0990 | TK0283 | Oxaloacetate decarboxylase, alpha subunit. | Homocitrate synthase. | 0.823 |
| TK0990 | fba | TK0990 | TK0989 | Oxaloacetate decarboxylase, alpha subunit. | DhnA-type fructose-1,6-bisphosphate aldolase; Belongs to the DeoC/FbaB aldolase family. | 0.626 |
| TK1676 | TK0218 | TK1676 | TK0218 | Nicotinate-nucleotide pyrophosphorylase. | Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.987 |
| TK1676 | TK0720 | TK1676 | TK0720 | Nicotinate-nucleotide pyrophosphorylase. | Hypothetical protein, conserved. | 0.490 |
| TK2109 | TK2248 | TK2109 | TK2248 | Biotin synthase-related protein, radical SAM superfamily. | Biotin synthase-related protein, radical SAM superfamily. | 0.960 |
| TK2145 | queE | TK2145 | TK1198 | Hypothetical protein, conserved, radical SAM superfamily. | Organic radical activating enzyme, radical SAM superfamily; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.552 |
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