20 items (Aspergillus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9WF01	Uncharacterized protein. (412 aa)
	A0A1L9WFM6	Uncharacterized protein. (524 aa)
	A0A1L9WGI3	Uncharacterized protein. (1205 aa)
	A0A1L9WIA4	Uncharacterized protein. (520 aa)
	A0A1L9WIT9	Zn(2)-C6 fungal-type domain-containing protein. (506 aa)
	A0A1L9WJI2	Fido domain-containing protein. (98 aa)
	A0A1L9WJR8	Poly [ADP-ribose] polymerase. (653 aa)
	A0A1L9WMV0	Uncharacterized protein. (236 aa)
	A0A1L9WPN5	Uncharacterized protein. (622 aa)
	A0A1L9WS94	Zn(2)-C6 fungal-type domain-containing protein. (504 aa)
	A0A1L9WW01	Uncharacterized protein. (79 aa)
	A0A1L9WX60	Uncharacterized protein. (198 aa)
	A0A1L9WXX4	Uncharacterized protein. (1035 aa)
	A0A1L9WXY4	PCI domain-containing protein. (455 aa)
	A0A1L9WZ87	Uncharacterized protein. (1008 aa)
	A0A1L9WZJ5	Uncharacterized protein. (226 aa)
	A0A1L9X3S5	SP-RING-type domain-containing protein. (960 aa)
	A0A1L9X6T1	Uncharacterized protein. (290 aa)
	A0A1L9X8M1	BRCT domain-containing protein. (310 aa)
	A0A1L9X935	Macro domain-containing protein. (362 aa)

Your Current Organism:

Aspergillus aculeatus

NCBI taxonomy Id: 690307
Other names: A. aculeatus ATCC 16872, Aspergillus aculeatus ATCC 16872

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9WF01	A0A1L9WJR8	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.799
A0A1L9WF01	A0A1L9X8M1	Uncharacterized protein.	BRCT domain-containing protein.	0.799
A0A1L9WFM6	A0A1L9WJR8	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.463
A0A1L9WFM6	A0A1L9X8M1	Uncharacterized protein.	BRCT domain-containing protein.	0.445
A0A1L9WGI3	A0A1L9WIA4	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A1L9WGI3	A0A1L9WMV0	Uncharacterized protein.	Uncharacterized protein.	0.907
A0A1L9WGI3	A0A1L9WPN5	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A1L9WGI3	A0A1L9WW01	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A1L9WGI3	A0A1L9WXY4	Uncharacterized protein.	PCI domain-containing protein.	0.939
A0A1L9WGI3	A0A1L9WZJ5	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A1L9WGI3	A0A1L9X6T1	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A1L9WIA4	A0A1L9WGI3	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A1L9WIA4	A0A1L9WPN5	Uncharacterized protein.	Uncharacterized protein.	0.837
A0A1L9WIA4	A0A1L9WW01	Uncharacterized protein.	Uncharacterized protein.	0.859
A0A1L9WIA4	A0A1L9WXY4	Uncharacterized protein.	PCI domain-containing protein.	0.951
A0A1L9WIT9	A0A1L9WJR8	Zn(2)-C6 fungal-type domain-containing protein.	Poly [ADP-ribose] polymerase.	0.799
A0A1L9WIT9	A0A1L9X8M1	Zn(2)-C6 fungal-type domain-containing protein.	BRCT domain-containing protein.	0.799
A0A1L9WJR8	A0A1L9WF01	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.799
A0A1L9WJR8	A0A1L9WFM6	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.463
A0A1L9WJR8	A0A1L9WIT9	Poly [ADP-ribose] polymerase.	Zn(2)-C6 fungal-type domain-containing protein.	0.799