5 items (Aspergillus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9WKW3	Uncharacterized protein. (1632 aa)
	A0A1L9WPC5	Uncharacterized protein. (1787 aa)
	A0A1L9X3N7	Uncharacterized protein. (1044 aa)
	A0A1L9X769	Uncharacterized protein. (1233 aa)
	A0A1L9X7Q5	Uncharacterized protein. (1002 aa)

Your Current Organism:

Aspergillus aculeatus

NCBI taxonomy Id: 690307
Other names: A. aculeatus ATCC 16872, Aspergillus aculeatus ATCC 16872

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9WKW3	A0A1L9WPC5	Uncharacterized protein.	Uncharacterized protein.	0.775
A0A1L9WKW3	A0A1L9X769	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A1L9WKW3	A0A1L9X7Q5	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A1L9WPC5	A0A1L9WKW3	Uncharacterized protein.	Uncharacterized protein.	0.775
A0A1L9WPC5	A0A1L9X3N7	Uncharacterized protein.	Uncharacterized protein.	0.804
A0A1L9WPC5	A0A1L9X769	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A1L9WPC5	A0A1L9X7Q5	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A1L9X3N7	A0A1L9WPC5	Uncharacterized protein.	Uncharacterized protein.	0.804
A0A1L9X3N7	A0A1L9X7Q5	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9X769	A0A1L9WKW3	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A1L9X769	A0A1L9WPC5	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A1L9X769	A0A1L9X7Q5	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A1L9X7Q5	A0A1L9WKW3	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A1L9X7Q5	A0A1L9WPC5	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A1L9X7Q5	A0A1L9X3N7	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9X7Q5	A0A1L9X769	Uncharacterized protein.	Uncharacterized protein.	0.658