16 items (Aspergillus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9X6U3	HMG box domain-containing protein. (691 aa)
	A0A1L9WNU3	HMG box domain-containing protein. (475 aa)
	A0A1L9WRQ9	B30.2/SPRY domain-containing protein. (617 aa)
	A0A1L9WVF5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3912 aa)
	A0A1L9WW84	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (264 aa)
	A0A1L9WWL5	Histone H2B; Belongs to the histone H2B family. (140 aa)
	A0A1L9WLD6	Methyltransf_11 domain-containing protein. (309 aa)
	A0A1L9WWS7	HMG box domain-containing protein. (318 aa)
	A0A1L9WX36	Uncharacterized protein. (591 aa)
	A0A1L9X249	BZIP domain-containing protein. (296 aa)
	A0A1L9X4K8	USP domain-containing protein; Belongs to the peptidase C19 family. (2523 aa)
	A0A1L9X6Q2	Uncharacterized protein. (353 aa)
	A0A1L9X759	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)
	A0A1L9X9P5	Ubiquitin-like domain-containing protein. (154 aa)
	A0A1L9WKP3	RING-type domain-containing protein. (120 aa)
	A0A1L9WGJ7	Methyltransf_11 domain-containing protein. (287 aa)

Your Current Organism:

Aspergillus aculeatus

NCBI taxonomy Id: 690307
Other names: A. aculeatus ATCC 16872, Aspergillus aculeatus ATCC 16872

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9WKP3	A0A1L9X249	RING-type domain-containing protein.	BZIP domain-containing protein.	0.916
A0A1L9WKP3	A0A1L9X9P5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.916
A0A1L9WNU3	A0A1L9WWS7	HMG box domain-containing protein.	HMG box domain-containing protein.	0.611
A0A1L9WNU3	A0A1L9X6Q2	HMG box domain-containing protein.	Uncharacterized protein.	0.611
A0A1L9WNU3	A0A1L9X6U3	HMG box domain-containing protein.	HMG box domain-containing protein.	0.611
A0A1L9WRQ9	A0A1L9WWL5	B30.2/SPRY domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.755
A0A1L9WRQ9	A0A1L9X249	B30.2/SPRY domain-containing protein.	BZIP domain-containing protein.	0.880
A0A1L9WRQ9	A0A1L9X9P5	B30.2/SPRY domain-containing protein.	Ubiquitin-like domain-containing protein.	0.880
A0A1L9WVF5	A0A1L9WWL5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Histone H2B; Belongs to the histone H2B family.	0.753
A0A1L9WVF5	A0A1L9X249	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	BZIP domain-containing protein.	0.817
A0A1L9WVF5	A0A1L9X759	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.988
A0A1L9WVF5	A0A1L9X9P5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ubiquitin-like domain-containing protein.	0.817
A0A1L9WWL5	A0A1L9WRQ9	Histone H2B; Belongs to the histone H2B family.	B30.2/SPRY domain-containing protein.	0.755
A0A1L9WWL5	A0A1L9WVF5	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.753
A0A1L9WWL5	A0A1L9X249	Histone H2B; Belongs to the histone H2B family.	BZIP domain-containing protein.	0.863
A0A1L9WWL5	A0A1L9X759	Histone H2B; Belongs to the histone H2B family.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.932
A0A1L9WWL5	A0A1L9X9P5	Histone H2B; Belongs to the histone H2B family.	Ubiquitin-like domain-containing protein.	0.863
A0A1L9WWS7	A0A1L9WNU3	HMG box domain-containing protein.	HMG box domain-containing protein.	0.611
A0A1L9X249	A0A1L9WKP3	BZIP domain-containing protein.	RING-type domain-containing protein.	0.916
A0A1L9X249	A0A1L9WRQ9	BZIP domain-containing protein.	B30.2/SPRY domain-containing protein.	0.880