STRINGSTRING
AEG48960.1 AEG48960.1 AEG48961.1 AEG48961.1 AEG48962.1 AEG48962.1 AEG48963.1 AEG48963.1 AEG48964.1 AEG48964.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEG48960.1PFAM: General secretion pathway M protein; KEGG: sjp:SJA_C1-23470 type II secretory pathway component PulM. (160 aa)
AEG48961.1PFAM: General secretion pathway L; KEGG: sjp:SJA_C1-23480 type II secretory pathway component PulL. (370 aa)
AEG48962.1KEGG: sjp:SJA_C1-23490 type II secretory pathway component PulK. (329 aa)
AEG48963.1TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: sjp:SJA_C1-23500 type II secretory pathway component PulJ. (204 aa)
AEG48964.1General secretion pathway protein I; KEGG: sjp:SJA_C1-23510 type II secretory pathway component PulI; TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal. (121 aa)
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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