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| | AEG47713.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-08330 PleD related family two-component system response regulator; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted. (558 aa) |
| | AEG47745.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-07920 putative diguanylate cyclase; SMART: Diguanylate cyclase, predicted. (291 aa) |
| | AEG47805.1 | BLUF domain protein; PFAM: BLUF; KEGG: sjp:SJA_C1-11310 putative BLUF domain protein. (138 aa) |
| | AEG47807.1 | Two component transcriptional regulator, LuxR family; KEGG: sjp:SJA_C1-11330 putative response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal. (205 aa) |
| | AEG47888.1 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: sjp:SJA_C1-12130 putative chemotaxis transducer; SMART: PAC motif. (234 aa) |
| | AEG47961.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-15680 OmpR-family two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (235 aa) |
| | AEG48040.1 | KEGG: sjp:SJA_C1-22690 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; Belongs to the UPF0758 family. (245 aa) |
| | AEG48103.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-14790 putative signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted. (576 aa) |
| | AEG48182.1 | PFAM: Glycosyl transferase, family 2; KEGG: pen:PSEEN2450 glycosyl transferase group 2 family protein. (391 aa) |
| | AEG48213.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-14160 putative diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted. (678 aa) |
| | AEG48226.1 | KEGG: sjp:SJA_C1-14280 putative methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling. (459 aa) |
| | miaA | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (314 aa) |
| | AEG48397.1 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (339 aa) |
| | AEG48398.1 | Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: sjp:SJA_C1-16740 two-component system histidine kinase GlnL/NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region. (369 aa) |
| | ntrC | Nitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (482 aa) |
| | AEG48400.1 | KEGG: sjp:SJA_C1-16720 putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region. (754 aa) |
| | AEG48401.1 | Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: sjp:SJA_C1-16710 two-component system response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (457 aa) |
| | hfq | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (160 aa) |
| | hflX | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (443 aa) |
| | AEG48468.1 | KEGG: sjp:SJA_C1-17170 DNA processing protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A. (360 aa) |
| | AEG48489.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: sjp:SJA_C1-17400 GGDEF-family protein; SMART: Diguanylate cyclase, predicted; HAMP linker domain. (602 aa) |
| | AEG48584.1 | KEGG: cak:Caul_2460 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (143 aa) |
| | AEG48585.1 | KEGG: cak:Caul_2968 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal. (204 aa) |
| | AEG48586.1 | Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: cak:Caul_2969 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS. (607 aa) |
| | AEG48652.1 | KEGG: azc:AZC_0618 regulatory protein; manually curated; PFAM: HTH transcriptional regulator, MarR. (154 aa) |
| | AEG48697.1 | PFAM: Protein of unknown function DUF2328; KEGG: sjp:SJA_C1-19390 hypothetical protein. (217 aa) |
| | AEG48797.1 | PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: sjp:SJA_C1-22710 two-component system sensor sporulation kinase C; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region. (524 aa) |
| | AEG48857.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-13420 putative signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted. (647 aa) |
| | AEG48906.1 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; KEGG: sjp:SJA_C1-15230 putative signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS. (840 aa) |
| | AEG48972.1 | Histidine kinase; KEGG: sjp:SJA_C1-23640 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like. (460 aa) |
| | AEG49038.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-24280 putative diguanylate cyclase; SMART: Diguanylate cyclase, predicted. (390 aa) |
| | AEG49073.1 | Integral membrane sensor signal transduction histidine kinase; KEGG: sjp:SJA_C1-25780 two-component system osmolarity sensor histidine kinase EnvZ; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region. (440 aa) |
| | AEG49074.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-25790 two-component system response regulator OmpR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (236 aa) |
| | AEG49078.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-25830 OmpR-family two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (236 aa) |
| | AEG49079.1 | KEGG: sjp:SJA_C1-25840 hypothetical protein. (150 aa) |
| | AEG49095.1 | Integral membrane sensor hybrid histidine kinase; KEGG: sjp:SJA_C1-27750 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region. (657 aa) |
| | AEG49198.1 | PFAM: Phosphoribosyltransferase; KEGG: sjp:SJA_C1-26460 putative amidophosphoribosyltransferase. (246 aa) |
| | AEG49259.1 | TIGRFAM: PAS; PFAM: PAS fold-3; GAF; Signal transduction histidine kinase, HWE region; KEGG: sjp:SJA_C1-07990 putative sensor histidine kinase; SMART: PAC motif; GAF; PAS. (507 aa) |
| | AEG49311.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-10800 two-component system response regulator CreB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (235 aa) |
| | AEG49312.1 | KEGG: sjp:SJA_C1-10790 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (531 aa) |
| | AEG49317.1 | Diguanylate cyclase with GAF sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: sjp:SJA_C1-10740 putative GAF sensor diguanylate cyclase; SMART: Diguanylate cyclase, predicted; GAF. (331 aa) |
| | AEG49340.1 | PFAM: MCP methyltransferase, CheR-type; KEGG: sjp:SJA_C1-10470 chemotaxis protein methyltransferase CheR; SMART: MCP methyltransferase, CheR-type. (299 aa) |
| | AEG49341.1 | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (358 aa) |
| | AEG49342.1 | KEGG: sjp:SJA_C1-10450 two-component system response regulator CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (121 aa) |
| | AEG49343.1 | CheW protein; KEGG: sjp:SJA_C1-10440 chemotaxis signal transduction protein; PFAM: CheW-like protein; SMART: CheW-like protein. (145 aa) |
| | AEG49344.1 | CheA signal transduction histidine kinase; KEGG: sjp:SJA_C1-10430 two-component system sensor kinase CheA; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein. (789 aa) |
| | AEG49387.1 | KEGG: sjp:SJA_C1-10700 twitching motility protein PilJ; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling. (443 aa) |
| | AEG49416.1 | KEGG: sjp:SJA_C1-28640 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (207 aa) |
| | AEG49433.1 | KEGG: swi:Swit_3214 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. (690 aa) |
| | AEG49444.1 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Type IV pilus assembly PilZ; KEGG: sjp:SJA_C1-09110 putative signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS. (868 aa) |
| | AEG49473.1 | Multi-sensor hybrid histidine kinase; KEGG: sjp:SJA_C1-32830 two-component system sensor sporulation kinase A; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region. (818 aa) |
| | AEG49521.1 | Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: sjp:SJA_C1-05930 magnesium chelatase family protein; SMART: ATPase, AAA+ type, core. (502 aa) |
| | AEG49594.1 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (504 aa) |
| | AEG49693.1 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-33750 putative diguanylate cyclase; SMART: Diguanylate cyclase, predicted. (354 aa) |
| | AEG49721.1 | Sigma54 specific transcriptional activator, PspF, Fis family; TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: sjp:SJA_C1-34140 psp operon transcriptional activator; SMART: ATPase, AAA+ type, core. (336 aa) |
| | AEG49942.1 | KEGG: sjp:SJA_C1-00820 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (116 aa) |
| | AEG50200.1 | KEGG: bph:Bphy_4529 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region. (764 aa) |
| | AEG50201.1 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold; KEGG: hch:HCH_03647 signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS. (722 aa) |
| | AEG50248.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-31110 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (239 aa) |
| | AEG50249.1 | KEGG: sjp:SJA_C1-31100 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (451 aa) |
| | AEG50264.1 | PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: sjp:SJA_C1-31090 chemotaxis MotB protein. (351 aa) |
| | AEG50265.1 | TIGRFAM: flagellar motor stator protein MotA; KEGG: sjp:SJA_C1-31080 chemotaxis MotA protein. (287 aa) |
| | AEG50266.1 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (281 aa) |
| | AEG50267.1 | KEGG: sjp:SJA_C1-31060 flagellar hook-associated protein 1 FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family. (446 aa) |
| | AEG50268.1 | PFAM: Flagellar protein FlgJ, N-terminal; KEGG: sjp:SJA_C1-31050 flagellar protein FlgJ. (108 aa) |
| | flgI | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (365 aa) |
| | flgH | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (218 aa) |
| | AEG50271.1 | KEGG: sjp:SJA_C1-31020 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family. (262 aa) |
| | AEG50272.1 | KEGG: sjp:SJA_C1-31010 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal. (246 aa) |
| | AEG50273.1 | KEGG: sjp:SJA_C1-31000 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal. (280 aa) |
| | AEG50274.1 | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (218 aa) |
| | AEG50275.1 | KEGG: sjp:SJA_C1-30980 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Belongs to the flagella basal body rod proteins family. (136 aa) |
| | AEG50276.1 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (122 aa) |
| | AEG50277.1 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: sjp:SJA_C1-30960 chemotaxis MotA protein. (222 aa) |
| | AEG50278.1 | KEGG: sjp:SJA_C1-30950 flagellar motor protein. (161 aa) |
| | AEG50279.1 | KEGG: sjp:SJA_C1-30940 flagellar protein. (182 aa) |
| | AEG50280.1 | KEGG: sjp:SJA_C1-30930 negative regulator of flagellin synthesis FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM. (93 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (706 aa) |
| | AEG50284.1 | RNA polymerase, sigma 28 subunit, FliA/WhiG; KEGG: sjp:SJA_C1-30890 RNA polymerase sigma factor for flagellar operon FliA; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2. (245 aa) |
| | AEG50287.1 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (277 aa) |
| | AEG50288.1 | Sigma54 specific transcriptional regulator, Fis family; KEGG: sjp:SJA_C1-30850 CheY-like response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core. (422 aa) |
| | fliE | TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: sjp:SJA_C1-30840 flagellar hook-basal body protein FliE; PFAM: Flagellar hook-basal body complex protein FliE. (119 aa) |
| | AEG50290.1 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (587 aa) |
| | AEG50291.1 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (337 aa) |
| | AEG50292.1 | KEGG: sjp:SJA_C1-30810 flagellar biosynthetic protein FliH. (210 aa) |
| | AEG50293.1 | ATPase, FliI/YscN family; TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; KEGG: sjp:SJA_C1-30800 flagellum-specific ATP synthase FliI; SMART: ATPase, AAA+ type, core. (442 aa) |
| | AEG50294.1 | KEGG: sjp:SJA_C1-30790 hypothetical protein. (141 aa) |
| | AEG50295.1 | KEGG: sjp:SJA_C1-30780 hypothetical protein. (580 aa) |
| | AEG50296.1 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (216 aa) |
| | AEG50297.1 | PFAM: Surface presentation of antigen (SpoA); Flagellar motor switch protein FliM; KEGG: sjp:SJA_C1-30760 flagellar motor switch protein FliM. (299 aa) |
| | AEG50298.1 | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (112 aa) |
| | AEG50299.1 | KEGG: sjp:SJA_C1-30740 flagellar biogenesis protein FliO. (88 aa) |
| | fliP | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (273 aa) |
| | fliQ | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (90 aa) |
| | AEG50302.1 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (260 aa) |
| | AEG50303.1 | PFAM: Type III secretion exporter; KEGG: sjp:SJA_C1-30700 flagellar biosynthetic protein FlhB. (379 aa) |
| | AEG50305.1 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (467 aa) |
| | AEG50306.1 | PFAM: Flagellar protein FliS; KEGG: sjp:SJA_C1-30670 flagellin-specific chaperone FliS. (131 aa) |
| | AEG50421.1 | Manually curated; PFAM: Signal transduction response regulator, receiver region; KEGG: sjp:SJA_C1-29360 CheY-like response regulator; SMART: Signal transduction response regulator, receiver region. (125 aa) |
| | AEG50425.1 | Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: sjp:SJA_C1-25650 two-component system response regulator HydG; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (482 aa) |
| | AEG50511.1 | Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; MASE1; PAS fold; KEGG: sjp:SJA_C1-07250 putative diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAS. (593 aa) |
| | AEG50573.1 | Metal dependent phosphohydrolase; KEGG: cja:CJA_3357 HD domain protein; TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain. (425 aa) |
| | AEG50591.1 | TIGRFAM: PAS; PFAM: PAS fold; Signal transduction histidine kinase, HWE region; KEGG: sjp:SJA_C1-10930 putative sensor histidine kinase; SMART: PAS; PAC motif. (339 aa) |
| | AEG50646.1 | Response regulator receiver; KEGG: azc:AZC_0618 regulatory protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (275 aa) |
| | AEG50788.1 | KEGG: sjp:SJA_C1-32160 putative methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling. (467 aa) |
| | AEG50962.1 | Two component transcriptional regulator, LuxR family; KEGG: sjp:SJA_C2-00460 NarL-family response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal. (207 aa) |
| | AEG50963.1 | TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: sjp:SJA_C2-00470 signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region. (381 aa) |
| | AEG51008.1 | KEGG: nca:Noca_1748 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (124 aa) |
| | AEG51013.1 | Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; GAF; Signal transduction response regulator, receiver region; KEGG: mgm:Mmc1_3189 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; GAF; PAS; Signal transduction response regulator, receiver region. (766 aa) |
| | AEG51108.1 | GAF sensor hybrid histidine kinase; KEGG: sjp:SJA_C2-05620 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region. (587 aa) |
| | AEG51110.1 | Hpt domain protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: bid:Bind_1958 multi-sensor hybrid histidine kinase. (125 aa) |
| | AEG51111.1 | Integral membrane sensor hybrid histidine kinase; KEGG: rhi:NGR_b14580 putative sensor-regulator protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; CHASE; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region. (914 aa) |
| | AEG51123.1 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; KEGG: sjp:SJA_C2-05540 putative sensor protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS. (704 aa) |
| | AEG51312.1 | Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; Signal transduction response regulator, receiver region; KEGG: nar:Saro_2627 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region. (1110 aa) |
| | AEG51333.1 | Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C2-03250 response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (248 aa) |
| | AEG51334.1 | KEGG: sjp:SJA_C2-03240 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (456 aa) |
| | AEG51523.1 | Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: pas sensor protein; SMART: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region. (869 aa) |
