STRINGSTRING
AEG48972.1 AEG48972.1 AEG49311.1 AEG49311.1 AEG49312.1 AEG49312.1 AEG49416.1 AEG49416.1 AEG49942.1 AEG49942.1 AEG50248.1 AEG50248.1 AEG50249.1 AEG50249.1 AEG51008.1 AEG51008.1 AEG51333.1 AEG51333.1 AEG51334.1 AEG51334.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEG48972.1Histidine kinase; KEGG: sjp:SJA_C1-23640 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like. (460 aa)
AEG49311.1Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-10800 two-component system response regulator CreB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (235 aa)
AEG49312.1KEGG: sjp:SJA_C1-10790 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (531 aa)
AEG49416.1KEGG: sjp:SJA_C1-28640 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (207 aa)
AEG49942.1KEGG: sjp:SJA_C1-00820 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (116 aa)
AEG50248.1Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C1-31110 CheY-like response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (239 aa)
AEG50249.1KEGG: sjp:SJA_C1-31100 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (451 aa)
AEG51008.1KEGG: nca:Noca_1748 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region. (124 aa)
AEG51333.1Two component transcriptional regulator, winged helix family; KEGG: sjp:SJA_C2-03250 response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region. (248 aa)
AEG51334.1KEGG: sjp:SJA_C2-03240 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain. (456 aa)
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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