STRINGSTRING
ntrC ntrC AEG48401.1 AEG48401.1 AEG48845.1 AEG48845.1 AEG49721.1 AEG49721.1 AEG50425.1 AEG50425.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
Predicted Interactions
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textmining
co-expression
protein homology
Your Input:
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (482 aa)
AEG48401.1Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: sjp:SJA_C1-16710 two-component system response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (457 aa)
AEG48845.1Two component, sigma54 specific, transcriptional regulator, Fis family; TIGRFAM: Signal transduction response regulator, PEP-CTERM system, putative; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: sjp:SJA_C1-23290 two-component system response regulator AtoC; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (454 aa)
AEG49721.1Sigma54 specific transcriptional activator, PspF, Fis family; TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: sjp:SJA_C1-34140 psp operon transcriptional activator; SMART: ATPase, AAA+ type, core. (336 aa)
AEG50425.1Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: sjp:SJA_C1-25650 two-component system response regulator HydG; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (482 aa)
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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