STRINGSTRING
Desaf_0187 Desaf_0187 tal tal eno eno Desaf_0812 Desaf_0812 Desaf_0850 Desaf_0850 pgi pgi Desaf_1160 Desaf_1160 Desaf_2091 Desaf_2091 Desaf_2391 Desaf_2391 Desaf_2392 Desaf_2392 Desaf_2455 Desaf_2455 tpiA tpiA pgk pgk fbp fbp Desaf_3217 Desaf_3217 Desaf_3687 Desaf_3687
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Desaf_0187TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dma:DMR_28790 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (367 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (448 aa)
Desaf_0812TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dma:DMR_28790 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (338 aa)
Desaf_08506-phosphofructokinase; KEGG: dde:Dde_1589 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase. (448 aa)
pgiHAMAP: Phosphoglucose isomerase (PGI); KEGG: tgr:Tgr7_0871 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); Belongs to the GPI family. (547 aa)
Desaf_11606-phosphofructokinase; KEGG: dba:Dbac_0531 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase. (443 aa)
Desaf_2091Fructose-1,6-bisphosphatase, class II; TIGRFAM: GlpX; KEGG: fructose-1,6-bisphosphatase; PFAM: GlpX. (327 aa)
Desaf_2391TIGRFAM: Fructose-1,6-bisphosphate aldolase, class II; Ketose-bisphosphate aldolase, class-II; KEGG: dvl:Dvul_1089 fructose-1,6-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II. (309 aa)
Desaf_2392TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dba:Dbac_0093 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (330 aa)
Desaf_2455Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (668 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
pgkHAMAP: Phosphoglycerate kinase; KEGG: dba:Dbac_0879 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (397 aa)
fbpHAMAP: Fructose-1,6-bisphosphatase; KEGG: dvm:DvMF_0404 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (340 aa)
Desaf_3217PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: pmr:PMI1592 fructose-bisphosphate aldolase. (349 aa)
Desaf_3687TIGRFAM: Pyruvate kinase; KEGG: dba:Dbac_3014 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; Belongs to the pyruvate kinase family. (473 aa)
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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