STRINGSTRING
Desaf_0810 Desaf_0810 Desaf_1253 Desaf_1253 Desaf_1254 Desaf_1254 Desaf_1255 Desaf_1255 Desaf_1256 Desaf_1256 Desaf_1257 Desaf_1257 Desaf_1258 Desaf_1258 Desaf_1271 Desaf_1271 Desaf_2107 Desaf_2107 Desaf_2108 Desaf_2108 Desaf_2109 Desaf_2109 Desaf_2110 Desaf_2110 lipB lipB lipA lipA Desaf_2270 Desaf_2270 Desaf_2271 Desaf_2271 Desaf_2272 Desaf_2272 Desaf_2347 Desaf_2347 acpP acpP Desaf_2349 Desaf_2349 fabH fabH acpS acpS Desaf_2740 Desaf_2740 Desaf_3205 Desaf_3205 Desaf_3660 Desaf_3660 Desaf_3661 Desaf_3661 Desaf_3662 Desaf_3662 Desaf_3663 Desaf_3663 Desaf_3664 Desaf_3664 Desaf_3665 Desaf_3665 acpP-2 acpP-2 Desaf_3667 Desaf_3667 Desaf_3668 Desaf_3668 Desaf_3669 Desaf_3669 Desaf_3670 Desaf_3670 Desaf_3671 Desaf_3671 Desaf_3672 Desaf_3672 Desaf_3673 Desaf_3673 Desaf_3674 Desaf_3674 Desaf_3675 Desaf_3675 Desaf_3676 Desaf_3676 Desaf_3677 Desaf_3677 Desaf_3678 Desaf_3678 Desaf_3679 Desaf_3679 Desaf_3680 Desaf_3680 Desaf_3681 Desaf_3681 Desaf_3682 Desaf_3682 Desaf_3683 Desaf_3683 Desaf_3684 Desaf_3684
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Desaf_0810KEGG: bpy:Bphyt_3837 beta-ketoacyl-acyl-carrier-protein synthase I; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. (346 aa)
Desaf_1253Hypothetical protein. (63 aa)
Desaf_1254KEGG: dps:DP1839 hypothetical protein. (143 aa)
Desaf_1255KEGG: dps:DP1838 hypothetical protein. (339 aa)
Desaf_1256Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dps:DP1837 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core. (263 aa)
Desaf_1257PFAM: ABC-2 type transporter; KEGG: dps:DP1836 ABC transporter permease. (429 aa)
Desaf_1258PFAM: Phosphopantetheine-binding protein; KEGG: dak:DaAHT2_1140 acyl carrier protein. (87 aa)
Desaf_1271PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: dps:DP1817 3-oxoacyl-(acyl carrier protein) synthase III. (384 aa)
Desaf_2107KEGG: dsa:Desal_1219 hypothetical protein. (84 aa)
Desaf_2108KEGG: hypothetical protein. (367 aa)
Desaf_2109PFAM: Ferredoxin; KEGG: iron-sulfur cluster-binding protein. (520 aa)
Desaf_2110PFAM: Ribosomal protein Rsm22, bacterial-type; KEGG: dsa:Desal_2804 ribosomal small subunit Rsm22. (787 aa)
lipBOctanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (217 aa)
lipALipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (285 aa)
Desaf_2270KEGG: dvm:DvMF_0817 biotin carboxylase; PFAM: Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal. (471 aa)
Desaf_2271KEGG: drt:Dret_1121 acetyl-CoA carboxylase; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region. (750 aa)
Desaf_2272KEGG: dsa:Desal_2840 hypothetical protein. (215 aa)
Desaf_23473-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (413 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (76 aa)
Desaf_23493-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
fabH3-oxoacyl-(acyl-carrier-protein) synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (332 aa)
acpSHolo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (123 aa)
Desaf_2740(Acyl-carrier-protein) S-malonyltransferase; KEGG: dba:Dbac_1606 acyl transferase; PFAM: Acyl transferase. (310 aa)
Desaf_3205Enoyl-(acyl-carrier-protein) reductase, NADH; KEGG: dvl:Dvul_2180 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (254 aa)
Desaf_3660PFAM: Beta-ketoacyl synthase, N-terminal; KEGG: beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (359 aa)
Desaf_3661KEGG: vfi:VF_0843 putative lipoprotein. (191 aa)
Desaf_3662KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (242 aa)
Desaf_3663KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (405 aa)
Desaf_3664PFAM: FAD dependent oxidoreductase; KEGG: dsa:Desal_0539 All-trans-retinol 13,14-reductase. (495 aa)
Desaf_3665KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (410 aa)
acpP-2Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (85 aa)
Desaf_3667KEGG: phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase. (264 aa)
Desaf_3668PFAM: AMP-dependent synthetase/ligase; KEGG: AMP-dependent synthetase and ligase. (437 aa)
Desaf_3669Radical SAM domain protein; KEGG: pca:Pcar_2660 Fe-S oxidoreductase, putative coenzyme synthesis protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (352 aa)
Desaf_3670PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ. (156 aa)
Desaf_3671Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (204 aa)
Desaf_3672KEGG: exporter. (795 aa)
Desaf_3673KEGG: hypothetical protein. (221 aa)
Desaf_3674PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: hypothetical protein. (129 aa)
Desaf_3675PFAM: Thioesterase superfamily; KEGG: thioesterase superfamily protein. (154 aa)
Desaf_3676KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (401 aa)
Desaf_3677PFAM: Beta-ketoacyl synthase, N-terminal; KEGG: beta-ketoacyl synthase. (246 aa)
Desaf_3678KEGG: ppd:Ppro_0919 radical SAM domain-containing protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (421 aa)
Desaf_3679KEGG: radical SAM domain-containing protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding protein; SMART: Elongator protein 3/MiaB/NifB. (457 aa)
Desaf_3680Radical SAM domain protein; KEGG: cobalamin B12-binding domain-containing protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding protein; SMART: Elongator protein 3/MiaB/NifB. (490 aa)
Desaf_3681PFAM: Glycosyl transferase, family 2; Protein of unknown function DUF2062; KEGG: pca:Pcar_2653 glycosyltransferase. (392 aa)
Desaf_3682PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: lipid A biosynthesis acyltransferase. (322 aa)
Desaf_3683PFAM: Phosphopantetheine-binding protein; KEGG: phosphopantetheine-binding protein. (84 aa)
Desaf_3684KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (401 aa)
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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