STRINGSTRING
Desaf_0917 Desaf_0917 Desaf_1351 Desaf_1351 Desaf_2329 Desaf_2329 Desaf_2349 Desaf_2349 Desaf_0077 Desaf_0077 Desaf_0711 Desaf_0711 Desaf_2487 Desaf_2487 Desaf_2945 Desaf_2945 Desaf_3662 Desaf_3662
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Desaf_0917Serine 3-dehydrogenase; KEGG: dvl:Dvul_1374 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)
Desaf_1351KEGG: rce:RC1_0527 CDP-paratose 2-epimerase; PFAM: NAD-dependent epimerase/dehydratase. (367 aa)
Desaf_2329KEGG: rmr:Rmar_2034 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (250 aa)
Desaf_23493-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
Desaf_0077Glucose 1-dehydrogenase; KEGG: cyj:Cyan7822_5687 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (272 aa)
Desaf_0711PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: opr:Ocepr_0796 short-chain dehydrogenase/reductase sdr. (247 aa)
Desaf_2487KEGG: hel:HELO_2148 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (264 aa)
Desaf_2945KEGG: avn:Avin_11090 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR. (287 aa)
Desaf_3662KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (242 aa)
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.