STRINGSTRING
bioA bioA Desaf_0990 Desaf_0990 Desaf_0991 Desaf_0991 bioB bioB Desaf_2347 Desaf_2347 Desaf_2349 Desaf_2349 fabZ fabZ Desaf_3135 Desaf_3135 Desaf_3205 Desaf_3205 Desaf_3660 Desaf_3660 Desaf_3662 Desaf_3662 Desaf_3663 Desaf_3663 Desaf_3665 Desaf_3665 Desaf_3670 Desaf_3670 Desaf_3674 Desaf_3674 Desaf_3676 Desaf_3676 Desaf_3677 Desaf_3677 Desaf_3684 Desaf_3684
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bioADethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family. (691 aa)
Desaf_0990KEGG: dak:DaAHT2_1534 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II. (387 aa)
Desaf_0991PFAM: Alpha/beta hydrolase fold-1; KEGG: ade:Adeh_3732 alpha/beta hydrolase fold-1. (232 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (322 aa)
Desaf_23473-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (413 aa)
Desaf_23493-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
fabZ(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (157 aa)
Desaf_3135KEGG: dsa:Desal_2038 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase. (301 aa)
Desaf_3205Enoyl-(acyl-carrier-protein) reductase, NADH; KEGG: dvl:Dvul_2180 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (254 aa)
Desaf_3660PFAM: Beta-ketoacyl synthase, N-terminal; KEGG: beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (359 aa)
Desaf_3662KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (242 aa)
Desaf_3663KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (405 aa)
Desaf_3665KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (410 aa)
Desaf_3670PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ. (156 aa)
Desaf_3674PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: hypothetical protein. (129 aa)
Desaf_3676KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (401 aa)
Desaf_3677PFAM: Beta-ketoacyl synthase, N-terminal; KEGG: beta-ketoacyl synthase. (246 aa)
Desaf_3684KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (401 aa)
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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