(21 nodes) Mixed, incl. Domain present in ubiquitin-regulatory proteins, and CDC48, N-terminal subdomain network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBXN4	UBX domain protein 4. (488 aa)
	G3NCY1_GASAC	Nuclear VCP like. (842 aa)
	G3NIR4_GASAC	Ubiquitin recognition factor in ER associated degradation 1. (310 aa)
	G3NK49_GASAC	NSFL1 (p97) cofactor (p47). (375 aa)
	G3NLB6_GASAC	YOD1 deubiquitinase. (303 aa)
	G3NVV3_GASAC	UBX domain protein 11. (453 aa)
	G3NW73_GASAC	Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae). (1184 aa)
	G3NXD8_GASAC	Uncharacterized protein. (121 aa)
	G3NZ75_GASAC	Ataxin 3. (306 aa)
	G3P2R2_GASAC	Ubiquitination factor E4A (UFD2 homolog, yeast). (1076 aa)
	G3P597_GASAC	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	G3PFK3_GASAC	UBX domain protein 2A. (249 aa)
	G3PIR4_GASAC	Uncharacterized protein. (566 aa)
	G3PK47_GASAC	UBX domain protein 7. (531 aa)
	G3PN45_GASAC	NPL4 homolog, ubiquitin recognition factor. (632 aa)
	G3PN62_GASAC	UBX domain protein 6. (437 aa)
	SPATA5	Spermatogenesis associated 5. (895 aa)
	KATNAL2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (497 aa)
	G3Q4U8_GASAC	Zgc:136908; Belongs to the AAA ATPase family. (810 aa)
	G3Q5L7_GASAC	ASPSCR1 tether for SLC2A4, UBX domain containing. (496 aa)
	G3Q7Y0_GASAC	Phospholipase A2-activating protein. (810 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NCY1_GASAC	G3NIR4_GASAC	ENSGACP00000003181	ENSGACP00000005224	Nuclear VCP like.	Ubiquitin recognition factor in ER associated degradation 1.	0.860
G3NCY1_GASAC	G3NK49_GASAC	ENSGACP00000003181	ENSGACP00000005711	Nuclear VCP like.	NSFL1 (p97) cofactor (p47).	0.909
G3NCY1_GASAC	G3NLB6_GASAC	ENSGACP00000003181	ENSGACP00000006129	Nuclear VCP like.	YOD1 deubiquitinase.	0.825
G3NCY1_GASAC	G3NVV3_GASAC	ENSGACP00000003181	ENSGACP00000009472	Nuclear VCP like.	UBX domain protein 11.	0.909
G3NCY1_GASAC	G3NW73_GASAC	ENSGACP00000003181	ENSGACP00000009592	Nuclear VCP like.	Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).	0.609
G3NCY1_GASAC	G3NXD8_GASAC	ENSGACP00000003181	ENSGACP00000010007	Nuclear VCP like.	Uncharacterized protein.	0.595
G3NCY1_GASAC	G3NZ75_GASAC	ENSGACP00000003181	ENSGACP00000010647	Nuclear VCP like.	Ataxin 3.	0.793
G3NCY1_GASAC	G3P2R2_GASAC	ENSGACP00000003181	ENSGACP00000011885	Nuclear VCP like.	Ubiquitination factor E4A (UFD2 homolog, yeast).	0.609
G3NCY1_GASAC	G3P597_GASAC	ENSGACP00000003181	ENSGACP00000012770	Nuclear VCP like.	Valosin containing protein; Belongs to the AAA ATPase family.	0.667
G3NCY1_GASAC	G3PFK3_GASAC	ENSGACP00000003181	ENSGACP00000016377	Nuclear VCP like.	UBX domain protein 2A.	0.909
G3NCY1_GASAC	G3PIR4_GASAC	ENSGACP00000003181	ENSGACP00000017493	Nuclear VCP like.	Uncharacterized protein.	0.595
G3NCY1_GASAC	G3PK47_GASAC	ENSGACP00000003181	ENSGACP00000017977	Nuclear VCP like.	UBX domain protein 7.	0.976
G3NCY1_GASAC	G3PN45_GASAC	ENSGACP00000003181	ENSGACP00000019028	Nuclear VCP like.	NPL4 homolog, ubiquitin recognition factor.	0.925
G3NCY1_GASAC	G3PN62_GASAC	ENSGACP00000003181	ENSGACP00000019045	Nuclear VCP like.	UBX domain protein 6.	0.805
G3NCY1_GASAC	G3Q4U8_GASAC	ENSGACP00000003181	ENSGACP00000024902	Nuclear VCP like.	Zgc:136908; Belongs to the AAA ATPase family.	0.668
G3NCY1_GASAC	G3Q5L7_GASAC	ENSGACP00000003181	ENSGACP00000025173	Nuclear VCP like.	ASPSCR1 tether for SLC2A4, UBX domain containing.	0.805
G3NCY1_GASAC	G3Q7Y0_GASAC	ENSGACP00000003181	ENSGACP00000025994	Nuclear VCP like.	Phospholipase A2-activating protein.	0.725
G3NCY1_GASAC	KATNAL2	ENSGACP00000003181	ENSGACP00000023563	Nuclear VCP like.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.586
G3NCY1_GASAC	SPATA5	ENSGACP00000003181	ENSGACP00000022092	Nuclear VCP like.	Spermatogenesis associated 5.	0.683
G3NCY1_GASAC	UBXN4	ENSGACP00000003181	ENSGACP00000001992	Nuclear VCP like.	UBX domain protein 4.	0.817