STRINGSTRING
G3N4K0_GASAC G3N4K0_GASAC G3N5K7_GASAC G3N5K7_GASAC LSM10 LSM10 G3NDK9_GASAC G3NDK9_GASAC G3NDR5_GASAC G3NDR5_GASAC G3NF69_GASAC G3NF69_GASAC G3NG36_GASAC G3NG36_GASAC G3NI77_GASAC G3NI77_GASAC G3NJH3_GASAC G3NJH3_GASAC G3NLV0_GASAC G3NLV0_GASAC G3NLZ7_GASAC G3NLZ7_GASAC G3NM40_GASAC G3NM40_GASAC SNRPC SNRPC SNRPD1 SNRPD1 G3NQ98_GASAC G3NQ98_GASAC G3NSE6_GASAC G3NSE6_GASAC G3NU46_GASAC G3NU46_GASAC G3NUN1_GASAC G3NUN1_GASAC G3NYJ2_GASAC G3NYJ2_GASAC G3NYT4_GASAC G3NYT4_GASAC G3P0K4_GASAC G3P0K4_GASAC G3P0T9_GASAC G3P0T9_GASAC G3P105_GASAC G3P105_GASAC G3P253_GASAC G3P253_GASAC G3P3L5_GASAC G3P3L5_GASAC G3P5Y3_GASAC G3P5Y3_GASAC G3P7W6_GASAC G3P7W6_GASAC G3PA33_GASAC G3PA33_GASAC G3PC51_GASAC G3PC51_GASAC G3PC73_GASAC G3PC73_GASAC G3PDC6_GASAC G3PDC6_GASAC G3PDS4_GASAC G3PDS4_GASAC G3PIM5_GASAC G3PIM5_GASAC G3PIN9_GASAC G3PIN9_GASAC G3PLX6_GASAC G3PLX6_GASAC G3PR91_GASAC G3PR91_GASAC G3PS33_GASAC G3PS33_GASAC NCBP1 NCBP1 SART1 SART1 G3PZX4_GASAC G3PZX4_GASAC G3Q5I4_GASAC G3Q5I4_GASAC G3Q7Z9_GASAC G3Q7Z9_GASAC G3Q9D2_GASAC G3Q9D2_GASAC G3QBM3_GASAC G3QBM3_GASAC G3QCE0_GASAC G3QCE0_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3N4K0_GASACDEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1012 aa)
G3N5K7_GASACSmall nuclear ribonucleoprotein 70 (U1). (390 aa)
LSM10LSM10, U7 small nuclear RNA associated. (122 aa)
G3NDK9_GASACPRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (939 aa)
G3NDR5_GASACSplicing factor 3b, subunit 3. (1218 aa)
G3NF69_GASACDEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family. (791 aa)
G3NG36_GASACSmall nuclear ribonucleoprotein-associated protein. (238 aa)
G3NI77_GASACSplicing factor 3b, subunit 4. (395 aa)
G3NJH3_GASACRNA binding motif protein 42. (403 aa)
G3NLV0_GASACPHD finger protein 5A. (111 aa)
G3NLZ7_GASACSplicing factor 3b, subunit 6. (125 aa)
G3NM40_GASACPre-mRNA processing factor 4Bb. (1023 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (149 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
G3NQ98_GASACSmall nuclear ribonucleoprotein 40 (U5). (377 aa)
G3NSE6_GASACNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (165 aa)
G3NU46_GASACSmall nuclear ribonucleoprotein Sm D2. (118 aa)
G3NUN1_GASACUncharacterized protein. (191 aa)
G3NYJ2_GASACLeucine rich repeat containing 51. (181 aa)
G3NYT4_GASACSplicing factor 3a, subunit 3. (501 aa)
G3P0K4_GASACUbiquitin specific peptidase 39. (506 aa)
G3P0T9_GASACThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
G3P105_GASACPre-mRNA processing factor 8. (2344 aa)
G3P253_GASACSplicing factor 3b, subunit 1. (1312 aa)
G3P3L5_GASACElongation factor Tu GTP binding domain containing 2. (971 aa)
G3P5Y3_GASACSmall nuclear ribonucleoprotein polypeptide A. (277 aa)
G3P7W6_GASACSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
G3PA33_GASACSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
G3PC51_GASACPRP31 pre-mRNA processing factor 31 homolog (yeast). (534 aa)
G3PC73_GASACSmall nuclear ribonucleoprotein 200 (U5). (2147 aa)
G3PDC6_GASACPRP3 pre-mRNA processing factor 3 homolog (yeast). (702 aa)
G3PDS4_GASACSplicing factor 3a, subunit 1. (785 aa)
G3PIM5_GASACSmall nuclear ribonucleoprotein polypeptide G. (43 aa)
G3PIN9_GASACSmall nuclear ribonucleoprotein 27 (U4/U6.U5). (155 aa)
G3PLX6_GASACSmall nuclear ribonucleoprotein polypeptide A. (294 aa)
G3PR91_GASACSplicing factor 3a, subunit 2. (292 aa)
G3PS33_GASACPRP4 pre-mRNA processing factor 4 homolog (yeast). (503 aa)
NCBP1Nuclear cap binding protein subunit 1. (810 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (770 aa)
G3PZX4_GASACSmall nuclear ribonucleoprotein Sm D3. (128 aa)
G3Q5I4_GASACSplicing factor 3b, subunit 2. (655 aa)
G3Q7Z9_GASACSmall nuclear ribonucleoprotein polypeptide B2. (224 aa)
G3Q9D2_GASACSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
G3QBM3_GASACSmall nuclear ribonucleoprotein 35 (U11/U12). (232 aa)
G3QCE0_GASACRNA binding motif protein 41. (390 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.