(14 nodes) dDENN domain, and Rab protein signal transduction network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3NH97_GASAC	DENN/MADD domain containing 2Da. (517 aa)
	DENND2A	DENN domain containing 2A. (940 aa)
	DENND3	DENN domain containing 3. (1285 aa)
	G3NKL5_GASAC	DENN/MADD domain containing 2C. (555 aa)
	DENND1B	DENN domain containing 1B. (385 aa)
	G3P2G8_GASAC	Uncharacterized protein. (1269 aa)
	G3PJY9_GASAC	RAB35, member RAS oncogene family b. (201 aa)
	G3PQ04_GASAC	Si:dkey-16l2.16. (225 aa)
	G3PSS1_GASAC	Suppression of tumorigenicity 5. (1138 aa)
	G3PWH6_GASAC	RAB12, member RAS oncogene family. (244 aa)
	G3Q2U6_GASAC	DENN/MADD domain containing 1A. (950 aa)
	G3Q4X9_GASAC	Uncharacterized protein. (250 aa)
	G3Q4Y3_GASAC	Si:dkey-76b14.2. (386 aa)
	G3Q5A6_GASAC	UDENN domain-containing protein. (645 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DENND1B	G3NKL5_GASAC	ENSGACP00000010484	ENSGACP00000005878	DENN domain containing 1B.	DENN/MADD domain containing 2C.	0.529
DENND1B	G3PJY9_GASAC	ENSGACP00000010484	ENSGACP00000017919	DENN domain containing 1B.	RAB35, member RAS oncogene family b.	0.908
DENND1B	G3PQ04_GASAC	ENSGACP00000010484	ENSGACP00000019689	DENN domain containing 1B.	Si:dkey-16l2.16.	0.908
DENND1B	G3Q2U6_GASAC	ENSGACP00000010484	ENSGACP00000024195	DENN domain containing 1B.	DENN/MADD domain containing 1A.	0.690
DENND2A	G3PJY9_GASAC	ENSGACP00000005007	ENSGACP00000017919	DENN domain containing 2A.	RAB35, member RAS oncogene family b.	0.847
DENND2A	G3PQ04_GASAC	ENSGACP00000005007	ENSGACP00000019689	DENN domain containing 2A.	Si:dkey-16l2.16.	0.847
DENND3	G3PWH6_GASAC	ENSGACP00000005280	ENSGACP00000021965	DENN domain containing 3.	RAB12, member RAS oncogene family.	0.805
G3NH97_GASAC	G3PJY9_GASAC	ENSGACP00000004705	ENSGACP00000017919	DENN/MADD domain containing 2Da.	RAB35, member RAS oncogene family b.	0.847
G3NH97_GASAC	G3PQ04_GASAC	ENSGACP00000004705	ENSGACP00000019689	DENN/MADD domain containing 2Da.	Si:dkey-16l2.16.	0.847
G3NKL5_GASAC	DENND1B	ENSGACP00000005878	ENSGACP00000010484	DENN/MADD domain containing 2C.	DENN domain containing 1B.	0.529
G3NKL5_GASAC	G3PJY9_GASAC	ENSGACP00000005878	ENSGACP00000017919	DENN/MADD domain containing 2C.	RAB35, member RAS oncogene family b.	0.847
G3NKL5_GASAC	G3PQ04_GASAC	ENSGACP00000005878	ENSGACP00000019689	DENN/MADD domain containing 2C.	Si:dkey-16l2.16.	0.847
G3P2G8_GASAC	G3PWH6_GASAC	ENSGACP00000011791	ENSGACP00000021965	Uncharacterized protein.	RAB12, member RAS oncogene family.	0.805
G3PJY9_GASAC	DENND1B	ENSGACP00000017919	ENSGACP00000010484	RAB35, member RAS oncogene family b.	DENN domain containing 1B.	0.908
G3PJY9_GASAC	DENND2A	ENSGACP00000017919	ENSGACP00000005007	RAB35, member RAS oncogene family b.	DENN domain containing 2A.	0.847
G3PJY9_GASAC	G3NH97_GASAC	ENSGACP00000017919	ENSGACP00000004705	RAB35, member RAS oncogene family b.	DENN/MADD domain containing 2Da.	0.847
G3PJY9_GASAC	G3NKL5_GASAC	ENSGACP00000017919	ENSGACP00000005878	RAB35, member RAS oncogene family b.	DENN/MADD domain containing 2C.	0.847
G3PJY9_GASAC	G3PQ04_GASAC	ENSGACP00000017919	ENSGACP00000019689	RAB35, member RAS oncogene family b.	Si:dkey-16l2.16.	0.844
G3PJY9_GASAC	G3PSS1_GASAC	ENSGACP00000017919	ENSGACP00000020657	RAB35, member RAS oncogene family b.	Suppression of tumorigenicity 5.	0.847
G3PJY9_GASAC	G3PWH6_GASAC	ENSGACP00000017919	ENSGACP00000021965	RAB35, member RAS oncogene family b.	RAB12, member RAS oncogene family.	0.414