16 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3N4P3_GASAC	DUF1943 domain-containing protein. (96 aa)
	G3N6J1_GASAC	Uncharacterized protein. (230 aa)
	G3N717_GASAC	Uncharacterized protein; Belongs to the CD36 family. (439 aa)
	G3NCV4_GASAC	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (500 aa)
	G3NCX8_GASAC	Apolipoprotein Ea. (286 aa)
	G3NFN7_GASAC	Phospholipid transfer protein. (497 aa)
	G3NFZ0_GASAC	Lecithin-cholesterol acyltransferase. (423 aa)
	G3NGM5_GASAC	Uncharacterized protein. (256 aa)
	G3NGN5_GASAC	Uncharacterized protein. (267 aa)
	G3NGQ8_GASAC	Apolipoprotein Eb. (264 aa)
	G3NGS3_GASAC	Uncharacterized protein. (87 aa)
	G3NRQ2_GASAC	Apolipoprotein A-Ib. (263 aa)
	G3P570_GASAC	Vitellogenin domain-containing protein. (1648 aa)
	G3P573_GASAC	Uncharacterized protein. (445 aa)
	G3PU39_GASAC	Uncharacterized protein. (552 aa)
	G3Q9N6_GASAC	DUF1943 domain-containing protein. (96 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N4P3_GASAC	G3N6J1_GASAC	ENSGACP00000000263	ENSGACP00000000916	DUF1943 domain-containing protein.	Uncharacterized protein.	0.728
G3N4P3_GASAC	G3N717_GASAC	ENSGACP00000000263	ENSGACP00000001092	DUF1943 domain-containing protein.	Uncharacterized protein; Belongs to the CD36 family.	0.785
G3N4P3_GASAC	G3NCV4_GASAC	ENSGACP00000000263	ENSGACP00000003154	DUF1943 domain-containing protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.736
G3N4P3_GASAC	G3NCX8_GASAC	ENSGACP00000000263	ENSGACP00000003178	DUF1943 domain-containing protein.	Apolipoprotein Ea.	0.801
G3N4P3_GASAC	G3NFN7_GASAC	ENSGACP00000000263	ENSGACP00000004142	DUF1943 domain-containing protein.	Phospholipid transfer protein.	0.565
G3N4P3_GASAC	G3NGM5_GASAC	ENSGACP00000000263	ENSGACP00000004481	DUF1943 domain-containing protein.	Uncharacterized protein.	0.865
G3N4P3_GASAC	G3NGN5_GASAC	ENSGACP00000000263	ENSGACP00000004491	DUF1943 domain-containing protein.	Uncharacterized protein.	0.865
G3N4P3_GASAC	G3NGQ8_GASAC	ENSGACP00000000263	ENSGACP00000004514	DUF1943 domain-containing protein.	Apolipoprotein Eb.	0.781
G3N4P3_GASAC	G3NGS3_GASAC	ENSGACP00000000263	ENSGACP00000004529	DUF1943 domain-containing protein.	Uncharacterized protein.	0.559
G3N4P3_GASAC	G3NRQ2_GASAC	ENSGACP00000000263	ENSGACP00000008005	DUF1943 domain-containing protein.	Apolipoprotein A-Ib.	0.859
G3N6J1_GASAC	G3N4P3_GASAC	ENSGACP00000000916	ENSGACP00000000263	Uncharacterized protein.	DUF1943 domain-containing protein.	0.728
G3N6J1_GASAC	G3NCV4_GASAC	ENSGACP00000000916	ENSGACP00000003154	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.844
G3N6J1_GASAC	G3NFN7_GASAC	ENSGACP00000000916	ENSGACP00000004142	Uncharacterized protein.	Phospholipid transfer protein.	0.689
G3N6J1_GASAC	G3NGM5_GASAC	ENSGACP00000000916	ENSGACP00000004481	Uncharacterized protein.	Uncharacterized protein.	0.409
G3N6J1_GASAC	G3NGN5_GASAC	ENSGACP00000000916	ENSGACP00000004491	Uncharacterized protein.	Uncharacterized protein.	0.409
G3N6J1_GASAC	G3NRQ2_GASAC	ENSGACP00000000916	ENSGACP00000008005	Uncharacterized protein.	Apolipoprotein A-Ib.	0.437
G3N6J1_GASAC	G3P570_GASAC	ENSGACP00000000916	ENSGACP00000012743	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.726
G3N6J1_GASAC	G3P573_GASAC	ENSGACP00000000916	ENSGACP00000012746	Uncharacterized protein.	Uncharacterized protein.	0.726
G3N6J1_GASAC	G3PU39_GASAC	ENSGACP00000000916	ENSGACP00000021126	Uncharacterized protein.	Uncharacterized protein.	0.713
G3N6J1_GASAC	G3Q9N6_GASAC	ENSGACP00000000916	ENSGACP00000026601	Uncharacterized protein.	DUF1943 domain-containing protein.	0.727