5 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CSDE1	Cold shock domain containing E1, RNA-binding. (797 aa)
	G3NS36_GASAC	RAP1A, member of RAS oncogene family b. (185 aa)
	G3NUJ6_GASAC	Phospholipase C, epsilon 1. (1831 aa)
	RAPGEF5-2	Uncharacterized protein. (587 aa)
	G3QCJ1_GASAC	Rap guanine nucleotide exchange factor (GEF) 6. (727 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	G3NS36_GASAC	ENSGACP00000006002	ENSGACP00000008153	Cold shock domain containing E1, RNA-binding.	RAP1A, member of RAS oncogene family b.	0.594
CSDE1	G3NUJ6_GASAC	ENSGACP00000006002	ENSGACP00000009014	Cold shock domain containing E1, RNA-binding.	Phospholipase C, epsilon 1.	0.921
CSDE1	G3QCJ1_GASAC	ENSGACP00000006002	ENSGACP00000027607	Cold shock domain containing E1, RNA-binding.	Rap guanine nucleotide exchange factor (GEF) 6.	0.749
CSDE1	RAPGEF5-2	ENSGACP00000006002	ENSGACP00000010631	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.716
G3NS36_GASAC	CSDE1	ENSGACP00000008153	ENSGACP00000006002	RAP1A, member of RAS oncogene family b.	Cold shock domain containing E1, RNA-binding.	0.594
G3NS36_GASAC	G3NUJ6_GASAC	ENSGACP00000008153	ENSGACP00000009014	RAP1A, member of RAS oncogene family b.	Phospholipase C, epsilon 1.	0.893
G3NS36_GASAC	G3QCJ1_GASAC	ENSGACP00000008153	ENSGACP00000027607	RAP1A, member of RAS oncogene family b.	Rap guanine nucleotide exchange factor (GEF) 6.	0.951
G3NS36_GASAC	RAPGEF5-2	ENSGACP00000008153	ENSGACP00000010631	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.818
G3NUJ6_GASAC	CSDE1	ENSGACP00000009014	ENSGACP00000006002	Phospholipase C, epsilon 1.	Cold shock domain containing E1, RNA-binding.	0.921
G3NUJ6_GASAC	G3NS36_GASAC	ENSGACP00000009014	ENSGACP00000008153	Phospholipase C, epsilon 1.	RAP1A, member of RAS oncogene family b.	0.893
G3QCJ1_GASAC	CSDE1	ENSGACP00000027607	ENSGACP00000006002	Rap guanine nucleotide exchange factor (GEF) 6.	Cold shock domain containing E1, RNA-binding.	0.749
G3QCJ1_GASAC	G3NS36_GASAC	ENSGACP00000027607	ENSGACP00000008153	Rap guanine nucleotide exchange factor (GEF) 6.	RAP1A, member of RAS oncogene family b.	0.951
G3QCJ1_GASAC	RAPGEF5-2	ENSGACP00000027607	ENSGACP00000010631	Rap guanine nucleotide exchange factor (GEF) 6.	Uncharacterized protein.	0.832
RAPGEF5-2	CSDE1	ENSGACP00000010631	ENSGACP00000006002	Uncharacterized protein.	Cold shock domain containing E1, RNA-binding.	0.716
RAPGEF5-2	G3NS36_GASAC	ENSGACP00000010631	ENSGACP00000008153	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.818
RAPGEF5-2	G3QCJ1_GASAC	ENSGACP00000010631	ENSGACP00000027607	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 6.	0.832