28 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	G3Q1K0_GASAC	Pre-mRNA processing factor 19. (505 aa)
	G3QCB6_GASAC	Gem (nuclear organelle) associated protein 5. (1455 aa)
	G3NG36_GASAC	Small nuclear ribonucleoprotein-associated protein. (238 aa)
	G3NDK9_GASAC	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (939 aa)
	G3NC64_GASAC	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (695 aa)
	G3N824_GASAC	Serine/threonine kinase receptor associated protein. (328 aa)
	G3N4M7_GASAC	Uncharacterized protein. (255 aa)
	G3P1Y2_GASAC	Spliceosome associated factor 3, U4/U6 recycling protein. (901 aa)
	G3P514_GASAC	Gem (nuclear organelle) associated protein 7. (132 aa)
	G3P8S9_GASAC	Survival of motor neuron 1, telomeric. (280 aa)
	G3PA33_GASAC	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	G3PC51_GASAC	PRP31 pre-mRNA processing factor 31 homolog (yeast). (534 aa)
	G3PDC6_GASAC	PRP3 pre-mRNA processing factor 3 homolog (yeast). (702 aa)
	G3PFT7_GASAC	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (274 aa)
	G3PIM5_GASAC	Small nuclear ribonucleoprotein polypeptide G. (43 aa)
	G3PIT7_GASAC	Chloride channel, nucleotide-sensitive, 1A. (233 aa)
	G3PMH0_GASAC	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (628 aa)
	G3PNS0_GASAC	Gem (nuclear organelle) associated protein 8. (197 aa)
	G3PZX4_GASAC	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	G3Q9D2_GASAC	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	G3NI70_GASAC	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (149 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	G3NNS9_GASAC	Uncharacterized protein. (166 aa)
	G3NP18_GASAC	Gem (nuclear organelle) associated protein 4. (1084 aa)
	G3NU46_GASAC	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (150 aa)
	G3P105_GASAC	Pre-mRNA processing factor 8. (2344 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N4M7_GASAC	G3N824_GASAC	ENSGACP00000000247	ENSGACP00000001458	Uncharacterized protein.	Serine/threonine kinase receptor associated protein.	0.984
G3N4M7_GASAC	G3NC64_GASAC	ENSGACP00000000247	ENSGACP00000002913	Uncharacterized protein.	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...]	0.497
G3N4M7_GASAC	G3NDK9_GASAC	ENSGACP00000000247	ENSGACP00000003409	Uncharacterized protein.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.781
G3N4M7_GASAC	G3NG36_GASAC	ENSGACP00000000247	ENSGACP00000004291	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.837
G3N4M7_GASAC	G3NI70_GASAC	ENSGACP00000000247	ENSGACP00000005030	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.720
G3N4M7_GASAC	G3NNS9_GASAC	ENSGACP00000000247	ENSGACP00000006993	Uncharacterized protein.	Uncharacterized protein.	0.987
G3N4M7_GASAC	G3NP18_GASAC	ENSGACP00000000247	ENSGACP00000007082	Uncharacterized protein.	Gem (nuclear organelle) associated protein 4.	0.990
G3N4M7_GASAC	G3NU46_GASAC	ENSGACP00000000247	ENSGACP00000008864	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.850
G3N4M7_GASAC	G3P105_GASAC	ENSGACP00000000247	ENSGACP00000011278	Uncharacterized protein.	Pre-mRNA processing factor 8.	0.789
G3N4M7_GASAC	G3P1Y2_GASAC	ENSGACP00000000247	ENSGACP00000011605	Uncharacterized protein.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.420
G3N4M7_GASAC	G3P514_GASAC	ENSGACP00000000247	ENSGACP00000012687	Uncharacterized protein.	Gem (nuclear organelle) associated protein 7.	0.985
G3N4M7_GASAC	G3P8S9_GASAC	ENSGACP00000000247	ENSGACP00000014003	Uncharacterized protein.	Survival of motor neuron 1, telomeric.	0.992
G3N4M7_GASAC	G3PA33_GASAC	ENSGACP00000000247	ENSGACP00000014457	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.880
G3N4M7_GASAC	G3PC51_GASAC	ENSGACP00000000247	ENSGACP00000015175	Uncharacterized protein.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.448
G3N4M7_GASAC	G3PDC6_GASAC	ENSGACP00000000247	ENSGACP00000015600	Uncharacterized protein.	PRP3 pre-mRNA processing factor 3 homolog (yeast).	0.487
G3N4M7_GASAC	G3PFT7_GASAC	ENSGACP00000000247	ENSGACP00000016461	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.954
G3N4M7_GASAC	G3PIM5_GASAC	ENSGACP00000000247	ENSGACP00000017453	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide G.	0.842
G3N4M7_GASAC	G3PIT7_GASAC	ENSGACP00000000247	ENSGACP00000017516	Uncharacterized protein.	Chloride channel, nucleotide-sensitive, 1A.	0.643
G3N4M7_GASAC	G3PMH0_GASAC	ENSGACP00000000247	ENSGACP00000018801	Uncharacterized protein.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.581
G3N4M7_GASAC	G3PNS0_GASAC	ENSGACP00000000247	ENSGACP00000019253	Uncharacterized protein.	Gem (nuclear organelle) associated protein 8.	0.981