40 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PTA2_GASAC	Solute carrier family 39 member 6. (225 aa)
	G3N8D5_GASAC	Uncharacterized protein. (191 aa)
	G3N9B2_GASAC	ADAM metallopeptidase domain 17b. (817 aa)
	MPP5	Membrane palmitoylated protein 5; Belongs to the MAGUK family. (662 aa)
	G3NC64_GASAC	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (695 aa)
	G3NCH2_GASAC	Solute carrier family 39 member 10. (790 aa)
	G3NDT0_GASAC	Peptidase S72 domain-containing protein. (880 aa)
	G3NFA8_GASAC	Dystroglycan 1. (765 aa)
	G3NFB2_GASAC	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (518 aa)
	G3NHG5_GASAC	Uncharacterized protein. (206 aa)
	SRF	Serum response factor. (507 aa)
	G3NI51_GASAC	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
	G3NJL3_GASAC	Protein kinase domain-containing protein. (762 aa)
	G3NL19_GASAC	Fibronectin leucine rich transmembrane 3. (646 aa)
	G3NM94_GASAC	Phosphatase and actin regulator. (583 aa)
	G3NPC4_GASAC	Ras homolog family member Cb. (193 aa)
	G3NQ93_GASAC	Uncharacterized protein. (193 aa)
	G3NU51_GASAC	Cellular communication network factor 1. (376 aa)
	G3NWL6_GASAC	Phosphatase and actin regulator. (718 aa)
	G3NY01_GASAC	Phosphatase and actin regulator. (706 aa)
	G3P0Y5_GASAC	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (657 aa)
	G3P1A0_GASAC	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (516 aa)
	G3P2F0_GASAC	ADAM metallopeptidase domain 17a. (859 aa)
	G3P4W2_GASAC	Uncharacterized protein. (327 aa)
	G3P4Z8_GASAC	Uncharacterized protein. (193 aa)
	RHOB	Ras homolog family member B. (196 aa)
	G3P6B8_GASAC	Uncharacterized protein. (193 aa)
	G3PBZ4_GASAC	Link domain-containing protein. (226 aa)
	G3PDP7_GASAC	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (337 aa)
	G3PHZ0_GASAC	Phosphatase and actin regulator. (586 aa)
	G3PLM9_GASAC	Blood vessel epicardial substance. (352 aa)
	G3PVM2_GASAC	Rho GTPase activating protein 24. (780 aa)
	G3PVX4_GASAC	Homeobox protein. (313 aa)
	G3PX27_GASAC	T-box transcription factor 5a. (525 aa)
	G3PYK7_GASAC	Mab-21-like 2. (359 aa)
	G3PZT5_GASAC	POU domain protein. (475 aa)
	G3Q1Y5_GASAC	Uncharacterized protein. (220 aa)
	G3Q321_GASAC	Heparin-binding EGF-like growth factor a. (207 aa)
	G3Q5U3_GASAC	Ventral anterior homeobox 2. (309 aa)
	G3Q958_GASAC	MADS-box domain-containing protein. (473 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N8D5_GASAC	G3P0Y5_GASAC	ENSGACP00000001569	ENSGACP00000011258	Uncharacterized protein.	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.	0.436
G3N8D5_GASAC	G3P6B8_GASAC	ENSGACP00000001569	ENSGACP00000013141	Uncharacterized protein.	Uncharacterized protein.	0.604
G3N8D5_GASAC	G3PBZ4_GASAC	ENSGACP00000001569	ENSGACP00000015118	Uncharacterized protein.	Link domain-containing protein.	0.571
G3N8D5_GASAC	G3PVM2_GASAC	ENSGACP00000001569	ENSGACP00000021661	Uncharacterized protein.	Rho GTPase activating protein 24.	0.618
G3N8D5_GASAC	G3Q1Y5_GASAC	ENSGACP00000001569	ENSGACP00000023884	Uncharacterized protein.	Uncharacterized protein.	0.618
G3N8D5_GASAC	G3Q321_GASAC	ENSGACP00000001569	ENSGACP00000024270	Uncharacterized protein.	Heparin-binding EGF-like growth factor a.	0.474
G3N8D5_GASAC	MPP5	ENSGACP00000001569	ENSGACP00000002456	Uncharacterized protein.	Membrane palmitoylated protein 5; Belongs to the MAGUK family.	0.436
G3N9B2_GASAC	G3Q321_GASAC	ENSGACP00000001902	ENSGACP00000024270	ADAM metallopeptidase domain 17b.	Heparin-binding EGF-like growth factor a.	0.720
G3NDT0_GASAC	G3NFA8_GASAC	ENSGACP00000003480	ENSGACP00000004010	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.895
G3NFA8_GASAC	G3NDT0_GASAC	ENSGACP00000004010	ENSGACP00000003480	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.895
G3NHG5_GASAC	G3P0Y5_GASAC	ENSGACP00000004773	ENSGACP00000011258	Uncharacterized protein.	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.	0.436
G3NHG5_GASAC	G3P6B8_GASAC	ENSGACP00000004773	ENSGACP00000013141	Uncharacterized protein.	Uncharacterized protein.	0.604
G3NHG5_GASAC	G3PBZ4_GASAC	ENSGACP00000004773	ENSGACP00000015118	Uncharacterized protein.	Link domain-containing protein.	0.571
G3NHG5_GASAC	G3PVM2_GASAC	ENSGACP00000004773	ENSGACP00000021661	Uncharacterized protein.	Rho GTPase activating protein 24.	0.618
G3NHG5_GASAC	G3Q1Y5_GASAC	ENSGACP00000004773	ENSGACP00000023884	Uncharacterized protein.	Uncharacterized protein.	0.618
G3NHG5_GASAC	G3Q321_GASAC	ENSGACP00000004773	ENSGACP00000024270	Uncharacterized protein.	Heparin-binding EGF-like growth factor a.	0.476
G3NHG5_GASAC	MPP5	ENSGACP00000004773	ENSGACP00000002456	Uncharacterized protein.	Membrane palmitoylated protein 5; Belongs to the MAGUK family.	0.436
G3NI51_GASAC	G3NL19_GASAC	ENSGACP00000005011	ENSGACP00000006032	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibronectin leucine rich transmembrane 3.	0.730
G3NI51_GASAC	G3PBZ4_GASAC	ENSGACP00000005011	ENSGACP00000015118	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Link domain-containing protein.	0.544
G3NL19_GASAC	G3NI51_GASAC	ENSGACP00000006032	ENSGACP00000005011	Fibronectin leucine rich transmembrane 3.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.730