20 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PLK1_GASAC	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (343 aa)
	G3PCY5_GASAC	Uncharacterized protein. (464 aa)
	G3P8N9_GASAC	Uncharacterized protein. (436 aa)
	G3P1N4_GASAC	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (623 aa)
	G3NZM1_GASAC	Progestin and adipoQ receptor family member VII, a. (353 aa)
	G3NZ05_GASAC	Retinoid x receptor, beta b. (449 aa)
	ESRRB	Estrogen-related receptor beta. (480 aa)
	G3NXA2_GASAC	Estrogen receptor 2a. (555 aa)
	G3NWS6_GASAC	Progestin and adipoQ receptor family member VII, b. (355 aa)
	ABHD2	Abhydrolase domain containing 2b. (433 aa)
	G3N5T7_GASAC	Uncharacterized protein. (124 aa)
	RXRB	Retinoid X receptor beta. (458 aa)
	G3N4Q4_GASAC	Uncharacterized protein. (176 aa)
	NR3C1	Nuclear receptor subfamily 3 group C member 1. (764 aa)
	G3QA92_GASAC	Estrogen-related receptor alpha. (433 aa)
	G3Q2H5_GASAC	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (779 aa)
	G3Q2E4_GASAC	Retinoid X receptor, alpha a. (457 aa)
	G3PXE3_GASAC	Abhydrolase domain containing 2a. (422 aa)
	G3PV39_GASAC	Estrogen-related receptor gamma a. (461 aa)
	G3PER2_GASAC	Progesterone receptor. (645 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ESRRB	G3QA92_GASAC	ENSGACP00000010001	ENSGACP00000026808	Estrogen-related receptor beta.	Estrogen-related receptor alpha.	0.678
G3N4Q4_GASAC	G3P1N4_GASAC	ENSGACP00000000274	ENSGACP00000011507	Uncharacterized protein.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.706
G3N4Q4_GASAC	G3PER2_GASAC	ENSGACP00000000274	ENSGACP00000016086	Uncharacterized protein.	Progesterone receptor.	0.873
G3N4Q4_GASAC	G3PLK1_GASAC	ENSGACP00000000274	ENSGACP00000018482	Uncharacterized protein.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.416
G3N4Q4_GASAC	G3QA92_GASAC	ENSGACP00000000274	ENSGACP00000026808	Uncharacterized protein.	Estrogen-related receptor alpha.	0.459
G3N5T7_GASAC	G3P1N4_GASAC	ENSGACP00000000661	ENSGACP00000011507	Uncharacterized protein.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.705
G3N5T7_GASAC	G3PER2_GASAC	ENSGACP00000000661	ENSGACP00000016086	Uncharacterized protein.	Progesterone receptor.	0.873
G3N5T7_GASAC	G3PLK1_GASAC	ENSGACP00000000661	ENSGACP00000018482	Uncharacterized protein.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.416
G3N5T7_GASAC	G3QA92_GASAC	ENSGACP00000000661	ENSGACP00000026808	Uncharacterized protein.	Estrogen-related receptor alpha.	0.459
G3NXA2_GASAC	G3P1N4_GASAC	ENSGACP00000009971	ENSGACP00000011507	Estrogen receptor 2a.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.684
G3NXA2_GASAC	G3PER2_GASAC	ENSGACP00000009971	ENSGACP00000016086	Estrogen receptor 2a.	Progesterone receptor.	0.873
G3NXA2_GASAC	G3PLK1_GASAC	ENSGACP00000009971	ENSGACP00000018482	Estrogen receptor 2a.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.416
G3NXA2_GASAC	G3QA92_GASAC	ENSGACP00000009971	ENSGACP00000026808	Estrogen receptor 2a.	Estrogen-related receptor alpha.	0.466
G3NZ05_GASAC	G3PCY5_GASAC	ENSGACP00000010576	ENSGACP00000015459	Retinoid x receptor, beta b.	Uncharacterized protein.	0.841
G3NZ05_GASAC	G3Q2E4_GASAC	ENSGACP00000010576	ENSGACP00000024043	Retinoid x receptor, beta b.	Retinoid X receptor, alpha a.	0.841
G3P1N4_GASAC	G3N4Q4_GASAC	ENSGACP00000011507	ENSGACP00000000274	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	Uncharacterized protein.	0.706
G3P1N4_GASAC	G3N5T7_GASAC	ENSGACP00000011507	ENSGACP00000000661	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	Uncharacterized protein.	0.705
G3P1N4_GASAC	G3NXA2_GASAC	ENSGACP00000011507	ENSGACP00000009971	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	Estrogen receptor 2a.	0.684
G3P1N4_GASAC	G3PER2_GASAC	ENSGACP00000011507	ENSGACP00000016086	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	Progesterone receptor.	0.887
G3P1N4_GASAC	G3PLK1_GASAC	ENSGACP00000011507	ENSGACP00000018482	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.685