STRINGSTRING
G3P5L1_GASAC G3P5L1_GASAC G3NDR5_GASAC G3NDR5_GASAC G3P5S1_GASAC G3P5S1_GASAC G3P6H9_GASAC G3P6H9_GASAC G3P7W6_GASAC G3P7W6_GASAC G3P804_GASAC G3P804_GASAC G3PU38_GASAC G3PU38_GASAC G3PT02_GASAC G3PT02_GASAC G3PS33_GASAC G3PS33_GASAC G3PR91_GASAC G3PR91_GASAC G3PQE4_GASAC G3PQE4_GASAC G3PNF0_GASAC G3PNF0_GASAC G3PLX6_GASAC G3PLX6_GASAC G3PKK4_GASAC G3PKK4_GASAC G3PKJ6_GASAC G3PKJ6_GASAC G3PIM5_GASAC G3PIM5_GASAC G3PGD1_GASAC G3PGD1_GASAC G3PII4_GASAC G3PII4_GASAC G3PI77_GASAC G3PI77_GASAC G3PA33_GASAC G3PA33_GASAC G3PC51_GASAC G3PC51_GASAC G3PC73_GASAC G3PC73_GASAC G3PH10_GASAC G3PH10_GASAC G3PCH6_GASAC G3PCH6_GASAC G3PDC6_GASAC G3PDC6_GASAC G3PDK1_GASAC G3PDK1_GASAC G3PDS4_GASAC G3PDS4_GASAC G3PF52_GASAC G3PF52_GASAC LSM4 LSM4 G3NYT4_GASAC G3NYT4_GASAC G3NWI0_GASAC G3NWI0_GASAC G3NVX4_GASAC G3NVX4_GASAC G3NU46_GASAC G3NU46_GASAC G3NR45_GASAC G3NR45_GASAC G3P8Z0_GASAC G3P8Z0_GASAC G3P8D4_GASAC G3P8D4_GASAC G3Q173_GASAC G3Q173_GASAC DHX15 DHX15 G3Q062_GASAC G3Q062_GASAC G3PZX4_GASAC G3PZX4_GASAC G3PZI1_GASAC G3PZI1_GASAC G3PYQ5_GASAC G3PYQ5_GASAC SART1 SART1 G3P5Q5_GASAC G3P5Q5_GASAC G3NG36_GASAC G3NG36_GASAC G3NGE9_GASAC G3NGE9_GASAC LSM3 LSM3 G3NHV3_GASAC G3NHV3_GASAC G3NHW9_GASAC G3NHW9_GASAC G3NI70_GASAC G3NI70_GASAC G3NI77_GASAC G3NI77_GASAC G3NLV0_GASAC G3NLV0_GASAC G3NLZ7_GASAC G3NLZ7_GASAC SNRPC SNRPC G3NMP8_GASAC G3NMP8_GASAC G3PXC1_GASAC G3PXC1_GASAC SMU1 SMU1 SNRPD1 SNRPD1 G3NP39_GASAC G3NP39_GASAC G3NPB2_GASAC G3NPB2_GASAC LSM5 LSM5 G3NQ98_GASAC G3NQ98_GASAC G3QCL0_GASAC G3QCL0_GASAC G3QBM4_GASAC G3QBM4_GASAC G3QAY7_GASAC G3QAY7_GASAC G3QAL6_GASAC G3QAL6_GASAC G3Q9D2_GASAC G3Q9D2_GASAC G3Q963_GASAC G3Q963_GASAC G3Q8I1_GASAC G3Q8I1_GASAC G3Q7K1_GASAC G3Q7K1_GASAC G3Q5I4_GASAC G3Q5I4_GASAC G3Q287_GASAC G3Q287_GASAC G3Q1S0_GASAC G3Q1S0_GASAC G3Q1K0_GASAC G3Q1K0_GASAC G3P0T9_GASAC G3P0T9_GASAC G3P105_GASAC G3P105_GASAC G3P1C5_GASAC G3P1C5_GASAC G3P1C7_GASAC G3P1C7_GASAC G3P253_GASAC G3P253_GASAC G3P3L5_GASAC G3P3L5_GASAC G3P4V7_GASAC G3P4V7_GASAC LOC100174884 LOC100174884 G3N4L7_GASAC G3N4L7_GASAC G3N9G4_GASAC G3N9G4_GASAC G3NAG5_GASAC G3NAG5_GASAC G3NBJ7_GASAC G3NBJ7_GASAC G3NDK9_GASAC G3NDK9_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3P5L1_GASACRing finger protein 113A. (328 aa)
G3NDR5_GASACSplicing factor 3b, subunit 3. (1218 aa)
G3P5S1_GASACSrc homology 2 domain containing transforming protein D, a. (363 aa)
G3P6H9_GASACXPA binding protein 2. (849 aa)
G3P7W6_GASACSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
G3P804_GASACLSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
G3PU38_GASACZgc:158803. (375 aa)
G3PT02_GASACCWC27 spliceosome associated cyclophilin. (429 aa)
G3PS33_GASACPRP4 pre-mRNA processing factor 4 homolog (yeast). (503 aa)
G3PR91_GASACSplicing factor 3a, subunit 2. (292 aa)
G3PQE4_GASACBtz domain-containing protein. (224 aa)
G3PNF0_GASACU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
G3PLX6_GASACSmall nuclear ribonucleoprotein polypeptide A. (294 aa)
G3PKK4_GASACUncharacterized protein. (393 aa)
G3PKJ6_GASACSmad nuclear interacting protein. (356 aa)
G3PIM5_GASACSmall nuclear ribonucleoprotein polypeptide G. (43 aa)
G3PGD1_GASACLUC7-like 3 pre-mRNA splicing factor. (433 aa)
G3PII4_GASACRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (157 aa)
G3PI77_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 34. (1129 aa)
G3PA33_GASACSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
G3PC51_GASACPRP31 pre-mRNA processing factor 31 homolog (yeast). (534 aa)
G3PC73_GASACSmall nuclear ribonucleoprotein 200 (U5). (2147 aa)
G3PH10_GASACPRP39 pre-mRNA processing factor 39 homolog (yeast). (744 aa)
G3PCH6_GASACCell division cycle 40 homolog (S. cerevisiae). (583 aa)
G3PDC6_GASACPRP3 pre-mRNA processing factor 3 homolog (yeast). (702 aa)
G3PDK1_GASACCrooked neck pre-mRNA splicing factor 1. (750 aa)
G3PDS4_GASACSplicing factor 3a, subunit 1. (785 aa)
G3PF52_GASACPRP18 pre-mRNA processing factor 18 homolog (yeast). (341 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (150 aa)
G3NYT4_GASACSplicing factor 3a, subunit 3. (501 aa)
G3NWI0_GASACSYF2 pre-mRNA-splicing factor. (239 aa)
G3NVX4_GASACPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
G3NU46_GASACSmall nuclear ribonucleoprotein Sm D2. (118 aa)
G3NR45_GASACPRP40 pre-mRNA processing factor 40 homolog A. (844 aa)
G3P8Z0_GASACU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (459 aa)
G3P8D4_GASACAquarius intron-binding spliceosomal factor. (1473 aa)
G3Q173_GASACSMU1 DNA replication regulator and spliceosomal factor b. (509 aa)
DHX15DEAH-box helicase 15. (753 aa)
G3Q062_GASACSi:ch211-114c17.1. (630 aa)
G3PZX4_GASACSmall nuclear ribonucleoprotein Sm D3. (128 aa)
G3PZI1_GASACMicrofibril associated protein 1. (439 aa)
G3PYQ5_GASACLSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (770 aa)
G3P5Q5_GASACYJU2 splicing factor homolog. (340 aa)
G3NG36_GASACSmall nuclear ribonucleoprotein-associated protein. (238 aa)
G3NGE9_GASACISY1 splicing factor homolog. (281 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
G3NHV3_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1163 aa)
G3NHW9_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1198 aa)
G3NI70_GASACU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
G3NI77_GASACSplicing factor 3b, subunit 4. (395 aa)
G3NLV0_GASACPHD finger protein 5A. (111 aa)
G3NLZ7_GASACSplicing factor 3b, subunit 6. (125 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (149 aa)
G3NMP8_GASACBCAS2 pre-mRNA processing factor. (225 aa)
G3PXC1_GASACPleiotropic regulator 1. (513 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
G3NP39_GASACSNW domain containing 1. (534 aa)
G3NPB2_GASACPre-mRNA processing factor 38A. (310 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
G3NQ98_GASACSmall nuclear ribonucleoprotein 40 (U5). (377 aa)
G3QCL0_GASACZinc finger, matrin-type 2. (201 aa)
G3QBM4_GASACBUD13 homolog. (505 aa)
G3QAY7_GASACHIV-1 Tat specific factor 1. (442 aa)
G3QAL6_GASACCWC15 spliceosome associated protein homolog. (236 aa)
G3Q9D2_GASACSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
G3Q963_GASACEukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (413 aa)
G3Q8I1_GASACCoiled-coil domain containing 130. (407 aa)
G3Q7K1_GASACDEAH (Asp-Glu-Ala-His) box helicase 15. (759 aa)
G3Q5I4_GASACSplicing factor 3b, subunit 2. (655 aa)
G3Q287_GASACCWC25 spliceosome associated protein homolog. (423 aa)
G3Q1S0_GASACRNA binding motif protein 22. (427 aa)
G3Q1K0_GASACPre-mRNA processing factor 19. (505 aa)
G3P0T9_GASACThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
G3P105_GASACPre-mRNA processing factor 8. (2344 aa)
G3P1C5_GASACCoiled-coil domain containing 12. (163 aa)
G3P1C7_GASACLUC7-like (S. cerevisiae). (367 aa)
G3P253_GASACSplicing factor 3b, subunit 1. (1312 aa)
G3P3L5_GASACElongation factor Tu GTP binding domain containing 2. (971 aa)
G3P4V7_GASACRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC100174884Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (834 aa)
G3N4L7_GASACPRP38_assoc domain-containing protein. (170 aa)
G3N9G4_GASACPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
G3NAG5_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 16. (1051 aa)
G3NBJ7_GASACCWC22 spliceosome associated protein homolog. (824 aa)
G3NDK9_GASACPRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (939 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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