8 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	G3PA33_GASAC	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	G3PC51_GASAC	PRP31 pre-mRNA processing factor 31 homolog (yeast). (534 aa)
	G3PIM5_GASAC	Small nuclear ribonucleoprotein polypeptide G. (43 aa)
	G3PZX4_GASAC	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	G3NG36_GASAC	Small nuclear ribonucleoprotein-associated protein. (238 aa)
	G3NU46_GASAC	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	G3Q9D2_GASAC	Small nuclear ribonucleoprotein polypeptide F. (85 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NG36_GASAC	G3NU46_GASAC	ENSGACP00000004291	ENSGACP00000008864	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D2.	0.996
G3NG36_GASAC	G3PA33_GASAC	ENSGACP00000004291	ENSGACP00000014457	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
G3NG36_GASAC	G3PC51_GASAC	ENSGACP00000004291	ENSGACP00000015175	Small nuclear ribonucleoprotein-associated protein.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.944
G3NG36_GASAC	G3PIM5_GASAC	ENSGACP00000004291	ENSGACP00000017453	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein polypeptide G.	0.994
G3NG36_GASAC	G3PZX4_GASAC	ENSGACP00000004291	ENSGACP00000023164	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.997
G3NG36_GASAC	G3Q9D2_GASAC	ENSGACP00000004291	ENSGACP00000026497	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein polypeptide F.	0.995
G3NG36_GASAC	SNRPD1	ENSGACP00000004291	ENSGACP00000006899	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995
G3NU46_GASAC	G3NG36_GASAC	ENSGACP00000008864	ENSGACP00000004291	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein-associated protein.	0.996
G3NU46_GASAC	G3PA33_GASAC	ENSGACP00000008864	ENSGACP00000014457	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
G3NU46_GASAC	G3PC51_GASAC	ENSGACP00000008864	ENSGACP00000015175	Small nuclear ribonucleoprotein Sm D2.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.982
G3NU46_GASAC	G3PIM5_GASAC	ENSGACP00000008864	ENSGACP00000017453	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide G.	0.999
G3NU46_GASAC	G3PZX4_GASAC	ENSGACP00000008864	ENSGACP00000023164	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
G3NU46_GASAC	G3Q9D2_GASAC	ENSGACP00000008864	ENSGACP00000026497	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
G3NU46_GASAC	SNRPD1	ENSGACP00000008864	ENSGACP00000006899	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
G3PA33_GASAC	G3NG36_GASAC	ENSGACP00000014457	ENSGACP00000004291	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein-associated protein.	0.996
G3PA33_GASAC	G3NU46_GASAC	ENSGACP00000014457	ENSGACP00000008864	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
G3PA33_GASAC	G3PC51_GASAC	ENSGACP00000014457	ENSGACP00000015175	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.992
G3PA33_GASAC	G3PIM5_GASAC	ENSGACP00000014457	ENSGACP00000017453	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein polypeptide G.	0.999
G3PA33_GASAC	G3PZX4_GASAC	ENSGACP00000014457	ENSGACP00000023164	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
G3PA33_GASAC	G3Q9D2_GASAC	ENSGACP00000014457	ENSGACP00000026497	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein polypeptide F.	0.999