69 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3P2X2_GASAC	Endoplasmic reticulum protein 44. (390 aa)
	G3P565_GASAC	Coiled-coil domain containing 115. (176 aa)
	G3P7P3_GASAC	Transmembrane p24 trafficking protein 1a. (223 aa)
	G3P8B0_GASAC	Transmembrane p24 trafficking protein 10. (215 aa)
	G3P8V7_GASAC	Myeloid-derived growth factor. (158 aa)
	G3PBR8_GASAC	ATPase H+ transporting accessory protein 1b. (435 aa)
	G3PE10_GASAC	ERGIC and golgi 2. (375 aa)
	G3PEU3_GASAC	Calcineurin-like EF-hand protein 1. (194 aa)
	G3PF04_GASAC	Thyroid hormone receptor interactor 11. (1989 aa)
	SEC22B	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (215 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (279 aa)
	G3PH23_GASAC	Nucleobindin 1. (465 aa)
	G3PIJ4_GASAC	Transmembrane 6 superfamily member 2. (386 aa)
	G3PIL7_GASAC	Transmembrane p24 trafficking protein 4. (220 aa)
	G3PIU7_GASAC	Uncharacterized protein. (235 aa)
	G3PIW0_GASAC	Trafficking protein particle complex 12. (778 aa)
	G3PLP4_GASAC	Cornichon family AMPA receptor auxiliary protein 4. (139 aa)
	G3PNV7_GASAC	Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1863 aa)
	WHAMM	WASP homolog associated with actin, golgi membranes and microtubules. (802 aa)
	G3PR61_GASAC	Uncharacterized protein. (209 aa)
	G3PS32_GASAC	IST1 factor associated with ESCRT-III. (359 aa)
	G3PSH4_GASAC	Transmembrane p24 trafficking protein 2. (200 aa)
	G3PSM5_GASAC	Nucleobindin 2a. (490 aa)
	G3PU29_GASAC	SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
	G3PVD9_GASAC	acidPPc domain-containing protein. (309 aa)
	G3PVE7_GASAC	Glucosamine 6-phosphate N-acetyltransferase. (184 aa)
	G3PVG3_GASAC	Transmembrane p24 trafficking protein 9. (218 aa)
	G3PVS0_GASAC	Lectin, mannose-binding, 1. (517 aa)
	G3PVV3_GASAC	Transmembrane p24 trafficking protein 3. (217 aa)
	G3PWE4_GASAC	Metallophosphoesterase 1. (381 aa)
	G3PWI0_GASAC	Heat shock protein 5; Belongs to the heat shock protein 70 family. (666 aa)
	G3PWJ5_GASAC	Prominin 1a. (816 aa)
	SURF4	Surfeit 4. (269 aa)
	G3PWZ9_GASAC	Lectin, mannose-binding 2-like a. (325 aa)
	G3PTT1_GASAC	Ecm29 proteasome adaptor and scaffold. (1851 aa)
	G3PXH1_GASAC	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B. (550 aa)
	G3PXV3_GASAC	Syntaxin 5A; Belongs to the syntaxin family. (322 aa)
	G3PY19_GASAC	Prominin 1 b. (862 aa)
	G3PY41_GASAC	Yip1 interacting factor homolog A (S. cerevisiae). (336 aa)
	G3Q9Q7_GASAC	Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. (410 aa)
	G3PX71_GASAC	Lectin, mannose-binding 2. (336 aa)
	G3Q922_GASAC	Uncharacterized protein. (360 aa)
	G3Q4P1_GASAC	Transmembrane p24 trafficking protein 1b. (252 aa)
	G3Q464_GASAC	Transmembrane protein 173. (390 aa)
	G3Q330_GASAC	Low density lipoprotein receptor-related protein associated protein 1. (330 aa)
	G3Q2W8_GASAC	Endoplasmic reticulum-golgi intermediate compartment 1. (290 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (103 aa)
	G3PYT8_GASAC	Signal peptide peptidase 3. (375 aa)
	G3N4N8_GASAC	ATPase H+ transporting accessory protein 1a. (470 aa)
	G3N882_GASAC	Phospholipid phosphatase 3. (268 aa)
	G3NDJ4_GASAC	Multiple coagulation factor deficiency 2. (154 aa)
	G3NEU6_GASAC	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A. (538 aa)
	G3NH08_GASAC	Chorein_N domain-containing protein. (420 aa)
	G3NH14_GASAC	Uncharacterized protein. (440 aa)
	G3NH17_GASAC	Uncharacterized protein. (267 aa)
	G3NHA4_GASAC	ERGIC and golgi 3. (391 aa)
	G3NP51_GASAC	Lectin, mannose-binding 2-like b. (333 aa)
	G3NP57_GASAC	Transmembrane protein 199. (200 aa)
	G3NQ60_GASAC	Transmembrane p24 trafficking protein 5. (233 aa)
	TRAPPC5	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
	G3NT01_GASAC	Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. (405 aa)
	G3NUD9_GASAC	CLN8 transmembrane ER and ERGIC protein. (282 aa)
	NUCB2	Nucleobindin 2. (442 aa)
	G3NVB8_GASAC	Vacuole membrane protein 1. (406 aa)
	G3NX60_GASAC	Transmembrane p24 trafficking protein 7. (219 aa)
	G3NY30_GASAC	Fibronectin 1a. (2501 aa)
	G3P054_GASAC	Yip1 interacting factor homolog B (S. cerevisiae). (309 aa)
	G3P118_GASAC	GOLD domain-containing protein. (240 aa)
	G3P2W2_GASAC	Syntaxin 17; Belongs to the syntaxin family. (296 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N4N8_GASAC	G3P565_GASAC	ENSGACP00000000258	ENSGACP00000012738	ATPase H+ transporting accessory protein 1a.	Coiled-coil domain containing 115.	0.729
G3N4N8_GASAC	G3PXV3_GASAC	ENSGACP00000000258	ENSGACP00000022442	ATPase H+ transporting accessory protein 1a.	Syntaxin 5A; Belongs to the syntaxin family.	0.547
G3N882_GASAC	G3PVD9_GASAC	ENSGACP00000001516	ENSGACP00000021576	Phospholipid phosphatase 3.	acidPPc domain-containing protein.	0.789
G3NDJ4_GASAC	G3NP51_GASAC	ENSGACP00000003394	ENSGACP00000007115	Multiple coagulation factor deficiency 2.	Lectin, mannose-binding 2-like b.	0.683
G3NDJ4_GASAC	G3PU29_GASAC	ENSGACP00000003394	ENSGACP00000021116	Multiple coagulation factor deficiency 2.	SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.	0.687
G3NDJ4_GASAC	G3PVS0_GASAC	ENSGACP00000003394	ENSGACP00000021709	Multiple coagulation factor deficiency 2.	Lectin, mannose-binding, 1.	0.997
G3NDJ4_GASAC	G3PWZ9_GASAC	ENSGACP00000003394	ENSGACP00000022138	Multiple coagulation factor deficiency 2.	Lectin, mannose-binding 2-like a.	0.683
G3NDJ4_GASAC	G3PX71_GASAC	ENSGACP00000003394	ENSGACP00000022210	Multiple coagulation factor deficiency 2.	Lectin, mannose-binding 2.	0.683
G3NDJ4_GASAC	G3PXV3_GASAC	ENSGACP00000003394	ENSGACP00000022442	Multiple coagulation factor deficiency 2.	Syntaxin 5A; Belongs to the syntaxin family.	0.672
G3NDJ4_GASAC	SEC22B	ENSGACP00000003394	ENSGACP00000016443	Multiple coagulation factor deficiency 2.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.685
G3NDJ4_GASAC	SURF4	ENSGACP00000003394	ENSGACP00000022005	Multiple coagulation factor deficiency 2.	Surfeit 4.	0.557
G3NEU6_GASAC	G3PXH1_GASAC	ENSGACP00000003847	ENSGACP00000022310	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.843
G3NH08_GASAC	G3NH14_GASAC	ENSGACP00000004615	ENSGACP00000004621	Chorein_N domain-containing protein.	Uncharacterized protein.	0.944
G3NH08_GASAC	G3NH17_GASAC	ENSGACP00000004615	ENSGACP00000004624	Chorein_N domain-containing protein.	Uncharacterized protein.	0.920
G3NH14_GASAC	G3NH08_GASAC	ENSGACP00000004621	ENSGACP00000004615	Uncharacterized protein.	Chorein_N domain-containing protein.	0.944
G3NH14_GASAC	G3NH17_GASAC	ENSGACP00000004621	ENSGACP00000004624	Uncharacterized protein.	Uncharacterized protein.	0.919
G3NH17_GASAC	G3NH08_GASAC	ENSGACP00000004624	ENSGACP00000004615	Uncharacterized protein.	Chorein_N domain-containing protein.	0.920
G3NH17_GASAC	G3NH14_GASAC	ENSGACP00000004624	ENSGACP00000004621	Uncharacterized protein.	Uncharacterized protein.	0.919
G3NHA4_GASAC	G3NP51_GASAC	ENSGACP00000004712	ENSGACP00000007115	ERGIC and golgi 3.	Lectin, mannose-binding 2-like b.	0.402
G3NHA4_GASAC	G3P8B0_GASAC	ENSGACP00000004712	ENSGACP00000013834	ERGIC and golgi 3.	Transmembrane p24 trafficking protein 10.	0.514