STRINGSTRING
G3NUN1_GASAC G3NUN1_GASAC G3QCE0_GASAC G3QCE0_GASAC G3QCB6_GASAC G3QCB6_GASAC G3QBV9_GASAC G3QBV9_GASAC G3QBV8_GASAC G3QBV8_GASAC G3QBM3_GASAC G3QBM3_GASAC G3Q7Z9_GASAC G3Q7Z9_GASAC G3Q7S8_GASAC G3Q7S8_GASAC G3Q3D7_GASAC G3Q3D7_GASAC G3Q1S0_GASAC G3Q1S0_GASAC G3PZX4_GASAC G3PZX4_GASAC G3PYU0_GASAC G3PYU0_GASAC G3PS33_GASAC G3PS33_GASAC G3PQ15_GASAC G3PQ15_GASAC G3PMU2_GASAC G3PMU2_GASAC G3PLX6_GASAC G3PLX6_GASAC G3PCP7_GASAC G3PCP7_GASAC G3PC51_GASAC G3PC51_GASAC G3P5Y3_GASAC G3P5Y3_GASAC G3P4V7_GASAC G3P4V7_GASAC G3P485_GASAC G3P485_GASAC G3P3L5_GASAC G3P3L5_GASAC G3P1Y2_GASAC G3P1Y2_GASAC G3P105_GASAC G3P105_GASAC G3P0I8_GASAC G3P0I8_GASAC LSM4 LSM4 G3NYJ2_GASAC G3NYJ2_GASAC G3NSE6_GASAC G3NSE6_GASAC SNRPC SNRPC LSM3 LSM3 G3NDR5_GASAC G3NDR5_GASAC LSM10 LSM10 G3NBZ2_GASAC G3NBZ2_GASAC G3NBG7_GASAC G3NBG7_GASAC G3N867_GASAC G3N867_GASAC G3N5K7_GASAC G3N5K7_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3NUN1_GASACUncharacterized protein. (191 aa)
G3QCE0_GASACRNA binding motif protein 41. (390 aa)
G3QCB6_GASACGem (nuclear organelle) associated protein 5. (1455 aa)
G3QBV9_GASACUncharacterized protein. (229 aa)
G3QBV8_GASACMethylphosphate capping enzyme. (383 aa)
G3QBM3_GASACSmall nuclear ribonucleoprotein 35 (U11/U12). (232 aa)
G3Q7Z9_GASACSmall nuclear ribonucleoprotein polypeptide B2. (224 aa)
G3Q7S8_GASACLa ribonucleoprotein domain family, member 7. (573 aa)
G3Q3D7_GASACLSM11, U7 small nuclear RNA associated. (222 aa)
G3Q1S0_GASACRNA binding motif protein 22. (427 aa)
G3PZX4_GASACSmall nuclear ribonucleoprotein Sm D3. (128 aa)
G3PYU0_GASACRNA binding motif protein X-linked. (396 aa)
G3PS33_GASACPRP4 pre-mRNA processing factor 4 homolog (yeast). (503 aa)
G3PQ15_GASACCyclin T2b; Belongs to the cyclin family. (532 aa)
G3PMU2_GASACTarget of EGR1, exonuclease. (480 aa)
G3PLX6_GASACSmall nuclear ribonucleoprotein polypeptide A. (294 aa)
G3PCP7_GASACCyclin T1; Belongs to the cyclin family. (681 aa)
G3PC51_GASACPRP31 pre-mRNA processing factor 31 homolog (yeast). (534 aa)
G3P5Y3_GASACSmall nuclear ribonucleoprotein polypeptide A. (277 aa)
G3P4V7_GASACRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
G3P485_GASACHEXIM P-TEFb complex subunit 1. (252 aa)
G3P3L5_GASACElongation factor Tu GTP binding domain containing 2. (971 aa)
G3P1Y2_GASACSpliceosome associated factor 3, U4/U6 recycling protein. (901 aa)
G3P105_GASACPre-mRNA processing factor 8. (2344 aa)
G3P0I8_GASACU6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (554 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (150 aa)
G3NYJ2_GASACLeucine rich repeat containing 51. (181 aa)
G3NSE6_GASACNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (165 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (149 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
G3NDR5_GASACSplicing factor 3b, subunit 3. (1218 aa)
LSM10LSM10, U7 small nuclear RNA associated. (122 aa)
G3NBZ2_GASACCyclin T2; Belongs to the cyclin family. (649 aa)
G3NBG7_GASACRNA-binding region (RNP1, RRM) containing 3. (517 aa)
G3N867_GASACBin3-type SAM domain-containing protein. (332 aa)
G3N5K7_GASACSmall nuclear ribonucleoprotein 70 (U1). (390 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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