11 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PZ22_GASAC	Mindbomb E3 ubiquitin protein ligase 1. (1030 aa)
	G3NES8_GASAC	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (772 aa)
	G3P3J1_GASAC	Forkhead box N4. (517 aa)
	RELN	Reelin. (3478 aa)
	G3P9T3_GASAC	LIM homeobox 4. (389 aa)
	G3PDH1_GASAC	Regulatory factor X, 4. (736 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (847 aa)
	G3Q821_GASAC	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (721 aa)
	G3Q3I0_GASAC	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (412 aa)
	G3Q3H4_GASAC	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
	LHX3	LIM homeobox 3. (377 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH2	G3NES8_GASAC	ENSGACP00000017426	ENSGACP00000003829	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	0.842
G3NES8_GASAC	CDH2	ENSGACP00000003829	ENSGACP00000017426	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.842
G3Q3H4_GASAC	G3Q821_GASAC	ENSGACP00000024426	ENSGACP00000026035	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.582
G3Q3I0_GASAC	G3Q821_GASAC	ENSGACP00000024432	ENSGACP00000026035	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.582
G3Q821_GASAC	G3Q3H4_GASAC	ENSGACP00000026035	ENSGACP00000024426	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.582
G3Q821_GASAC	G3Q3I0_GASAC	ENSGACP00000026035	ENSGACP00000024432	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.582