55 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PP59_GASAC	Amino acid transporter. (246 aa)
	G3PL80_GASAC	T-cell acute lymphocytic leukemia 2. (112 aa)
	G3PKR0_GASAC	Serine/threonine kinase 40. (436 aa)
	G3PG99_GASAC	Peptidylprolyl isomerase. (401 aa)
	G3PFN5_GASAC	Excision repair cross-complementation group 2. (815 aa)
	G3PBY5_GASAC	Amino acid transporter. (589 aa)
	G3P9K2_GASAC	Peptidylprolyl isomerase. (456 aa)
	G3P4T1_GASAC	Si:ch211-204d2.4. (191 aa)
	G3P3W5_GASAC	Lysine (K)-specific demethylase 6A. (1421 aa)
	G3P3T9_GASAC	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (462 aa)
	G3P1D8_GASAC	Protein kinase domain containing, cytoplasmic b. (320 aa)
	G3P0C8_GASAC	Selenoprotein M. (117 aa)
	G3NZK1_GASAC	Uncharacterized protein. (850 aa)
	G3NZJ0_GASAC	Uncharacterized protein. (237 aa)
	UNC79	Unc-79 homolog, NALCN channel complex subunit. (975 aa)
	G3NZ24_GASAC	Tensin 2b. (1377 aa)
	G3NY16_GASAC	E1A binding protein p300 b. (2411 aa)
	G3NXV8_GASAC	Tetratricopeptide repeat domain 8. (505 aa)
	G3NVX2_GASAC	WD and tetratricopeptide repeats 1. (669 aa)
	G3NVA2_GASAC	TAN domain-containing protein. (315 aa)
	G3NV93_GASAC	Non-specific serine/threonine protein kinase. (3105 aa)
	G3NV40_GASAC	Excision repair cross-complementation group 6. (1357 aa)
	G3NT44_GASAC	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
	G3NSL9_GASAC	Excision repair cross-complementation group 1. (333 aa)
	G3NS22_GASAC	Uncharacterized protein. (238 aa)
	G3NNN7_GASAC	Uncharacterized protein. (91 aa)
	G3Q8G3_GASAC	Sp2 transcription factor. (613 aa)
	LOC100174876	Androgen receptor. (758 aa)
	G3QAH0_GASAC	Uncharacterized protein. (2286 aa)
	G3QAS4_GASAC	Activating transcription factor 5a. (189 aa)
	G3NM95_GASAC	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2528 aa)
	G3NM42_GASAC	E1A binding protein p300 a. (2344 aa)
	G3NIV6_GASAC	Tensin 2a. (1396 aa)
	G3NHB3_GASAC	Homeobox domain-containing protein. (169 aa)
	G3Q821_GASAC	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (721 aa)
	G3NCC1_GASAC	Sphingomyelin phosphodiesterase 3, neutral. (646 aa)
	G3N9H0_GASAC	Homeobox protein engrailed-like. (295 aa)
	G3N8J6_GASAC	Uncharacterized protein. (214 aa)
	G3N884_GASAC	RECA_2 domain-containing protein. (291 aa)
	G3NGR9_GASAC	WD repeat domain 11. (1233 aa)
	G3Q5Z4_GASAC	Coiled-coil domain containing 151. (552 aa)
	G3Q3N7_GASAC	Uncharacterized protein. (681 aa)
	G3Q2I8_GASAC	ATRX chromatin remodeler. (2112 aa)
	G3Q1I3_GASAC	Uncharacterized protein. (182 aa)
	G3PZB0_GASAC	Ring finger and CCCH-type domains 2. (836 aa)
	G3PYC4_GASAC	Amino acid transporter. (548 aa)
	G3PX16_GASAC	Uncharacterized protein. (238 aa)
	G3PX13_GASAC	DWNN domain-containing protein. (146 aa)
	G3PWJ6_GASAC	Ankyrin repeat domain 12. (1944 aa)
	G3PSH6_GASAC	PID domain-containing protein. (301 aa)
	G3PSH4_GASAC	Transmembrane p24 trafficking protein 2. (200 aa)
	G3PQJ0_GASAC	Lysine (K)-specific demethylase 6A, like. (1403 aa)
	G3PQD5_GASAC	SLIT and NTRK-like family, member 6. (839 aa)
	SLITRK1	SLIT and NTRK like family member 1. (701 aa)
	G3PQ44_GASAC	Homeobox protein engrailed-like. (264 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N884_GASAC	G3N8J6_GASAC	ENSGACP00000001518	ENSGACP00000001632	RECA_2 domain-containing protein.	Uncharacterized protein.	0.669
G3N884_GASAC	G3NSL9_GASAC	ENSGACP00000001518	ENSGACP00000008337	RECA_2 domain-containing protein.	Excision repair cross-complementation group 1.	0.453
G3N884_GASAC	G3NV93_GASAC	ENSGACP00000001518	ENSGACP00000009262	RECA_2 domain-containing protein.	Non-specific serine/threonine protein kinase.	0.747
G3N884_GASAC	G3NVA2_GASAC	ENSGACP00000001518	ENSGACP00000009271	RECA_2 domain-containing protein.	TAN domain-containing protein.	0.747
G3N884_GASAC	G3PFN5_GASAC	ENSGACP00000001518	ENSGACP00000016409	RECA_2 domain-containing protein.	Excision repair cross-complementation group 2.	0.695
G3N884_GASAC	G3PWJ6_GASAC	ENSGACP00000001518	ENSGACP00000021985	RECA_2 domain-containing protein.	Ankyrin repeat domain 12.	0.669
G3N8J6_GASAC	G3N884_GASAC	ENSGACP00000001632	ENSGACP00000001518	Uncharacterized protein.	RECA_2 domain-containing protein.	0.669
G3N8J6_GASAC	G3NSL9_GASAC	ENSGACP00000001632	ENSGACP00000008337	Uncharacterized protein.	Excision repair cross-complementation group 1.	0.449
G3N8J6_GASAC	G3NV93_GASAC	ENSGACP00000001632	ENSGACP00000009262	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.661
G3N8J6_GASAC	G3NVA2_GASAC	ENSGACP00000001632	ENSGACP00000009271	Uncharacterized protein.	TAN domain-containing protein.	0.661
G3N8J6_GASAC	G3P3W5_GASAC	ENSGACP00000001632	ENSGACP00000012288	Uncharacterized protein.	Lysine (K)-specific demethylase 6A.	0.468
G3N8J6_GASAC	G3PQJ0_GASAC	ENSGACP00000001632	ENSGACP00000019875	Uncharacterized protein.	Lysine (K)-specific demethylase 6A, like.	0.468
G3N8J6_GASAC	G3Q5Z4_GASAC	ENSGACP00000001632	ENSGACP00000025300	Uncharacterized protein.	Coiled-coil domain containing 151.	0.436
G3N9H0_GASAC	G3NHB3_GASAC	ENSGACP00000001960	ENSGACP00000004721	Homeobox protein engrailed-like.	Homeobox domain-containing protein.	0.429
G3NHB3_GASAC	G3N9H0_GASAC	ENSGACP00000004721	ENSGACP00000001960	Homeobox domain-containing protein.	Homeobox protein engrailed-like.	0.429
G3NHB3_GASAC	G3PL80_GASAC	ENSGACP00000004721	ENSGACP00000018360	Homeobox domain-containing protein.	T-cell acute lymphocytic leukemia 2.	0.463
G3NHB3_GASAC	G3PQ44_GASAC	ENSGACP00000004721	ENSGACP00000019729	Homeobox domain-containing protein.	Homeobox protein engrailed-like.	0.429
G3NIV6_GASAC	G3NM95_GASAC	ENSGACP00000005266	ENSGACP00000006458	Tensin 2a.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.476
G3NIV6_GASAC	G3Q5Z4_GASAC	ENSGACP00000005266	ENSGACP00000025300	Tensin 2a.	Coiled-coil domain containing 151.	0.608
G3NM42_GASAC	G3NNN7_GASAC	ENSGACP00000006405	ENSGACP00000006951	E1A binding protein p300 a.	Uncharacterized protein.	0.698